RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 OR6X1Q8NH79 312 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 TMEM255BQ8WV15 326 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 BCL2L2Q92843 193 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-208ENST00000612050 SLC25A44Q96H78 314 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF426Q9BUY5 554 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 KATNB1Q9BVA0 655 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 TMUB1Q9BVT8 246 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 TAGLN3Q9UI15 199 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 FBXO9Q9UK97 447 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-208ENST00000612050 PMF1-BGLAPU3KQ54 211 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 AKAP6Q13023 2319 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 SHISA9B4DS77 424 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 RAB36O95755 333 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 HPRP00739 348 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 ASAH2BP0C7U1 165 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 PAX1P15863 534 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 APOBEC3AP31941 199 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-208ENST00000612050 GUCA1AP43080 201 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-208ENST00000612050 CRYBA2P53672 197 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 LGALS3BPQ08380 585 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 ANKDD1AQ495B1 522 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 SAMD4BQ5PRF9 694 aaKnown RBP10.78□□□□□ -0.68
CBWD3-208ENST00000612050 GLYATQ6IB77 296 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF730Q6ZMV8 503 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 WDR88Q6ZMY6 472 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 NKAIN4Q8IVV8 208 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 RNF113BQ8IZP6 322 aaKnown RBP10.78□□□□□ -0.68
CBWD3-208ENST00000612050 OFCC1Q8IZS5 231 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 TMEM123Q8N131 208 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 FAM169BQ8N8A8 192 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 WFDC11Q8NEX6 87 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 MCUR1Q96AQ8 359 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 HSH2DQ96JZ2 352 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 C18orf12Q96KH6 178 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 Q96MF0 132 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 PRSS27Q9BQR3 290 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 GRIP2Q9C0E4 1043 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 KCNN2Q9H2S1 579 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 DENND2DQ9H6A0 471 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-208ENST00000612050 INIPQ9NRY2 104 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 CBLN4Q9NTU7 201 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF701Q9NV72 531 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-208ENST00000612050 ABCD2Q9UBJ2 740 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 MAGEL2Q9UJ55 1249 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 SPEF1Q9Y4P9 236 aa10.78□□□□□ -0.68
CBWD3-208ENST00000612050 CENPBD1B2RD01 187 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 UBL3O95164 117 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 STAMBPO95630 424 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 ERCC1P07992 297 aaPredicted RBP10.77□□□□□ -0.68
CBWD3-208ENST00000612050 DANCRP0C864 163 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 CD79AP11912 226 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 IFI30P13284 250 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 CBR1P16152 277 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 TTKP33981 857 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 GYS2P54840 703 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 UGT2B15P54855 530 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 NPRL3Q12980 569 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 RAB35Q15286 201 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 GSG1Q2KHT4 349 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 C8orf82Q6P1X6 216 aaPredicted RBP10.77□□□□□ -0.68
CBWD3-208ENST00000612050 PIWIL3Q7Z3Z3 882 aaKnown RBP10.77□□□□□ -0.68
CBWD3-208ENST00000612050 DPPA2Q7Z7J5 298 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 BIVMQ86UB2 503 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 PGAM4Q8N0Y7 254 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 OR4F15Q8NGB8 312 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 LILRB1Q8NHL6 650 aaPredicted RBP10.77□□□□□ -0.68
CBWD3-208ENST00000612050 PFN4Q8NHR9 129 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 FNDC8Q8TC99 324 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 NEUROG1Q92886 237 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 BPIFA2Q96DR5 249 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 TXNDC15Q96J42 360 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 FOXB1Q99853 325 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 ANKRD19PQ9H560 264 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 MEPEQ9NQ76 525 aaPredicted RBP10.77□□□□□ -0.68
CBWD3-208ENST00000612050 TAS2R5Q9NYW4 299 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 GLTPQ9NZD2 209 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 MOKQ9UQ07 419 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 TMEM5Q9Y2B1 443 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 OTOGQ6ZRI0 2925 aa10.77□□□□□ -0.68
CBWD3-208ENST00000612050 MGRN1O60291 552 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 LYPD3O95274 346 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 THY1P04216 161 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 SOD3P08294 240 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 INHBBP09529 407 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 NCK1P16333 377 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 CDKN1AP38936 164 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 YAP1P46937 504 aaKnown RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 SLC9A3P48764 834 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 IDH3GP51553 393 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 SMIM11AP58511 58 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 SNRPD2P62316 118 aaKnown RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 GALK2Q01415 458 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 RPL18Q07020 188 aaKnown RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 MELKQ14680 651 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 SPATS1Q496A3 300 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 ALG10Q5BKT4 473 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 PIGWQ7Z7B1 504 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 VTCN1Q7Z7D3 282 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms