RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ATF1P18846 271 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 NPR2P20594 1047 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 RBMS1P29558 406 aaKnown RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 MAGEB1P43366 347 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 KIR2DL3P43628 341 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 RPL27P61353 136 aaKnown RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 FAM69BQ5VUD6 431 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 BICRALQ6AI39 1079 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 KCTD20Q7Z5Y7 419 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 FOXN4Q96NZ1 517 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ZNF587Q96SQ5 575 aaPredicted RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 INTS14Q96SY0 518 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 MED11Q9P086 117 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 TEKT2Q9UIF3 430 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 PPIEQ9UNP9 301 aaKnown RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 A0A087WV48 116 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 A0A0B4J203 849 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 MEIOCA2RUB1 952 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ANKUB1A6NFN9 424 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 B4DXG7 233 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 YKT6O15498 198 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 PRKAR1AP10644 381 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 MAP2K3P46734 347 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 PITPNBP48739 271 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 CENPAP49450 140 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 YIF1BQ5BJH7 314 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 OTPQ5XKR4 325 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ZNF57Q68EA5 555 aaPredicted RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 OR5L2Q8NGL0 311 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 OR5H6Q8NGV6 325 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 STK35Q8TDR2 534 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 THEM6Q8WUY1 208 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 RNF166Q96A37 237 aaPredicted RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 KLHL15Q96M94 604 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 FAM210AQ96ND0 272 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 HDHD2Q9H0R4 259 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 BRD7Q9NPI1 651 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 KLRF1Q9NZS2 232 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ING1Q9UK53 422 aaPredicted RBP12.3□□□□□ -0.44
NEK3-205ENST00000610828 EXPH5Q8NEV8 1989 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 PRSS37A4D1T9 235 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 OR2T1O43869 369 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 FZD7O75084 574 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 TRIM3O75382 744 aaPredicted RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 UPK3AO75631 287 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 PSKH1P11801 424 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 SNRPBP14678 240 aaKnown RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 SRMP19623 302 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 ARSKQ6UWY0 536 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 RDH10Q8IZV5 341 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 KDM8Q8N371 416 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 SCAIQ8N9R8 606 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 RPS4Y2Q8TD47 263 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 CHAC2Q8WUX2 184 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 HGDQ93099 445 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 SLC25A18Q9H1K4 315 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 TSPAN10Q9H1Z9 355 aaPredicted RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 NPAP1Q9NZP6 1156 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 PLPP3O14495 311 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 LYRM1O43325 122 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 IL11P20809 199 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 MELKQ14680 651 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 MZT2BQ6NZ67 158 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 UNQ9370/PRO34162Q6UXP9 181 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 OR5AK2Q8NH90 309 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 ZNF519Q8TB69 540 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 ST8SIA1Q92185 356 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 RGP1Q92546 391 aaPredicted RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 ARL5BQ96KC2 179 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 WACQ9BTA9 647 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 TXNIPQ9H3M7 391 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 RBFOX1Q9NWB1 397 aaKnown RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 FRRS1LQ9P0K9 344 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 C19orf25Q9UFG5 118 aaPredicted RBP12.29□□□□□ -0.44
NEK3-205ENST00000610828 KCNG2Q9UJ96 466 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 TMEM14AQ9Y6G1 99 aa12.29□□□□□ -0.44
NEK3-205ENST00000610828 PIN1P1O15428 100 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 SLC16A7O60669 478 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 OR2J2O76002 312 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 ZFAND5O76080 213 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 ABHD16AO95870 558 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 ALOX5APP20292 161 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 CCKBRP32239 447 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 ZXDAP98168 799 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 RSBN1Q5VWQ0 802 aaPredicted RBP12.28□□□□□ -0.44
NEK3-205ENST00000610828 FAM199XQ6PEV8 388 aaPredicted RBP12.28□□□□□ -0.44
NEK3-205ENST00000610828 PLET1Q6UQ28 207 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 C5orf46Q6UWT4 87 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 TRILQ7L0X0 811 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 GLCCI1Q86VQ1 547 aa12.28□□□□□ -0.44
NEK3-205ENST00000610828 MAML2Q8IZL2 1156 aaPredicted RBP12.28□□□□□ -0.44
NEK3-205ENST00000610828 ZNF433Q8N7K0 673 aaPredicted RBP12.28□□□□□ -0.44
NEK3-205ENST00000610828 ZNF671Q8TAW3 534 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms