RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 SMIM10L1P0DMW3 83 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 LAP3P28838 519 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 CHI3L1P36222 383 aaPredicted RBP2.13□□□□□ -2.07
HDDC2-207ENST00000608532 RGS4P49798 205 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 SYCNQ0VAF6 134 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 OR5I1Q13606 314 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 KIR2DS1Q14954 304 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 ZNF684Q5T5D7 378 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 UTS2BQ765I0 119 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 STRADAQ7RTN6 431 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 ECHDC2Q86YB7 292 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 MREGQ8N565 214 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 OR10G4Q8NGN3 311 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 RGP1Q92546 391 aaPredicted RBP2.13□□□□□ -2.07
HDDC2-207ENST00000608532 UBE2E3Q969T4 207 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 CXorf40BQ96DE9 158 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 SMIM10Q96HG1 83 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 TSSK3Q96PN8 268 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 THUMPD2Q9BTF0 503 aaKnown RBP2.13□□□□□ -2.07
HDDC2-207ENST00000608532 MCCC2Q9HCC0 563 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 ZNRD1Q9P1U0 126 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 PACSIN2Q9UNF0 486 aaPredicted RBP2.13□□□□□ -2.07
HDDC2-207ENST00000608532 KCNIP3Q9Y2W7 256 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 HSD17B6O14756 317 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 TOM1O60784 492 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 GAPDHP04406 335 aaKnown RBP2.12□□□□□ -2.07
HDDC2-207ENST00000608532 POLR2MP0CAP2 368 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 DRD5P21918 477 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 RORAP35398 523 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 GANABQ14697 944 aaKnown RBP2.12□□□□□ -2.07
HDDC2-207ENST00000608532 DPYSL2Q16555 572 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 C1orf220Q5T0J3 134 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 BRD3OSQ6XYD6 125 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 LRP11Q86VZ4 500 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 ESR2Q92731 530 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 SGK3Q96BR1 496 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 LRRN3Q9H3W5 708 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 RPP21Q9H633 154 aaKnown RBP2.12□□□□□ -2.07
HDDC2-207ENST00000608532 UGT1A7Q9HAW7 530 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 UGT1A10Q9HAW8 530 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 UGT1A8Q9HAW9 530 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 LY9Q9HBG7 655 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 EXD2Q9NVH0 621 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 BFARQ9NZS9 450 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 RNF14Q9UBS8 474 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 NUP214P35658 2090 aaPredicted RBP2.12□□□□□ -2.07
HDDC2-207ENST00000608532 GPR179Q6PRD1 2367 aa2.12□□□□□ -2.07
HDDC2-207ENST00000608532 IGLV3-22A0A075B6J6 115 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 OR5B21A6NL26 309 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 H0YHG0 523 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 PRRG1O14668 218 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 IGKV1D-16P01601 117 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 LINC00869P0C866 280 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 MDH1P40925 334 aaKnown RBP2.11□□□□□ -2.07
HDDC2-207ENST00000608532 RPS21P63220 83 aaKnown RBP2.11□□□□□ -2.07
HDDC2-207ENST00000608532 ERCC8Q13216 396 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 BIVMQ86UB2 503 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 ZNF547Q8IVP9 402 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 LGI3Q8N145 548 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 TRMT10AQ8TBZ6 339 aaKnown RBP2.11□□□□□ -2.07
HDDC2-207ENST00000608532 PYROXD1Q8WU10 500 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 WFIKKN1Q96NZ8 548 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 CHAC1Q9BUX1 264 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 POLE3Q9NRF9 147 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 POLDIP2Q9Y2S7 368 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 TMEM14AQ9Y6G1 99 aa2.11□□□□□ -2.07
HDDC2-207ENST00000608532 MSH6P52701 1360 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 CEMIPQ8WUJ3 1361 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TET2Q6N021 2002 aaPredicted RBP2.1□□□□□ -2.07
HDDC2-207ENST00000608532 IGLV3-12A0A075B6K2 115 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 RGSL1A5PLK6 1076 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 METTL21EPA6NDL7 271 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 GABARAPO95166 117 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 SLC25A14O95258 325 aaPredicted RBP2.1□□□□□ -2.07
HDDC2-207ENST00000608532 IFNB1P01574 187 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TCN1P20061 433 aaPredicted RBP2.1□□□□□ -2.07
HDDC2-207ENST00000608532 CRYBB1P53674 252 aaPredicted RBP2.1□□□□□ -2.07
HDDC2-207ENST00000608532 SUB1P53999 127 aaKnown RBP eCLIP2.1□□□□□ -2.07
HDDC2-207ENST00000608532 ESRRGP62508 458 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 NCBP1Q09161 790 aaKnown RBP2.1□□□□□ -2.07
HDDC2-207ENST00000608532 SCRN3Q0VDG4 424 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 KLRB1Q12918 225 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 GINS1Q14691 196 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 SLC36A3Q495N2 470 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TTC23Q5W5X9 447 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TMEM225Q6GV28 225 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 PIANPQ8IYJ0 282 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 FAM133AQ8N9E0 248 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 MED8Q96G25 268 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TTC25Q96NG3 672 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TPPP3Q9BW30 176 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 C12orf10Q9HB07 376 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 PALMDQ9NP74 551 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 ADAP2Q9NPF8 381 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 GPATCH2LQ9NWQ4 482 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 TAS2R3Q9NYW6 316 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 BRWD3Q6RI45 1802 aa2.1□□□□□ -2.07
HDDC2-207ENST00000608532 RPAP1Q9BWH6 1393 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms