RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 OR5M8Q8NGP6 311 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 OR1J2Q8NGS2 313 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 OR6N1Q8NGY5 312 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 ZCCHC10Q8TBK6 192 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 NEIL2Q969S2 332 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 R3HDM4Q96D70 268 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 TUBA4BQ9H853 241 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 FAM86C1Q9NVL1 165 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 CD84Q9UIB8 345 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 ATG4BQ9Y4P1 393 aa11.51□□□□□ -0.57
CTCFL-218ENST00000608440 EEF1E1-BLOC1S5C9J1V9 151 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF587BE7ETH6 402 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ADAM10O14672 748 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF208O43345 1280 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PQBP1O60828 265 aaKnown RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 CD14P08571 375 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PAX1P15863 534 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 RAB6AP20340 208 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 MSX1P28360 303 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 OR1E1P30953 314 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ADCK2Q7Z695 626 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 THOC6Q86W42 341 aaKnown RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 OR6T1Q8NGN1 323 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 TFGQ92734 400 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 FOXRED1Q96CU9 486 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 SLC6A16Q9GZN6 736 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 KPTNQ9Y664 436 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 CPSF4LA6NMK7 179 aaKnown RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF705GA8MUZ8 300 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 CCL5P13501 91 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 GSTM3P21266 225 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 HSD3B2P26439 372 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 CD34P28906 385 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 NTSP30990 170 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PPM1AP35813 382 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 GPR4P46093 362 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 DHPSP49366 369 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PRSS53Q2L4Q9 553 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 GGTA1PQ4G0N0 100 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 C14orf28Q4W4Y0 310 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 ZNF529Q6P280 563 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 MMP21Q8N119 569 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 EID2Q8N6I1 236 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 SLC30A7Q8NEW0 376 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 CD300LFQ8TDQ1 290 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 DCUN1D4Q92564 292 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
CTCFL-218ENST00000608440 PARP12Q9H0J9 701 aaKnown RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 MYOZ1Q9NP98 299 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-218ENST00000608440 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
CTCFL-218ENST00000608440 CDHR4A6H8M9 788 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 CD3DP04234 171 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 CRHP06850 196 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 RHOQP17081 205 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 PNPLA4P41247 253 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 PNLIPRP1P54315 467 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 CNTN1Q12860 1018 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 SERINC3Q13530 473 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 EIF4EBP2Q13542 120 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-218ENST00000608440 VWA2Q5GFL6 755 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 LCTLQ6UWM7 567 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 SZRD1Q7Z422 152 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 SVIPQ8NHG7 77 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 MR1Q95460 341 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HCAR1Q9BXC0 346 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 OR51V1Q9H2C8 321 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3DA0A087WVF3 549 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3IA0A087WXS9 549 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3EA0A087X179 549 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3KA0A087X1G2 549 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TRAV1-2A0A0B4J238 106 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 A0A0D9SEW6 157 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3FA6NER0 549 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3LB9A6J9 549 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 J3QRE1 110 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 OR2C1O95371 312 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 CHRM4P08173 479 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 DPP4P27487 766 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 ITPKBP27987 946 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HSD11B2P80365 405 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 MS4A13Q5J8X5 152 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3CQ6IPX1 549 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 LRRC70Q7Z2Q7 622 aa11.49□□□□□ -0.57
CTCFL-218ENST00000608440 TBC1D3Q8IZP1 549 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-218ENST00000608440 PAQR4Q8N4S7 273 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms