RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 A6NIZ1 184 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 GJE1A6NN92 205 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 BCL10O95999 233 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 OR2T7P0C7T2 308 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 CD79BP40259 229 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 P2RY4P51582 365 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 SH3BGRP55822 239 aaPredicted RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 RAP1BP61224 184 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 LSM3P62310 102 aaKnown RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 RAP1AP62834 184 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 MFAP5Q13361 173 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 SPCS2Q15005 226 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 ZNF239Q16600 458 aaKnown RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 EEF1A1P5Q5VTE0 462 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 SULF2Q8IWU5 870 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 PM20D2Q8IYS1 436 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 OR2T27Q8NH04 317 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 VSX1Q9NZR4 365 aaPredicted RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 POLHQ9Y253 713 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 ALPK2Q86TB3 2170 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 DCDC2BA2VCK2 349 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 NPIPA5E9PKD4 350 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 DCTN6O00399 190 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 TRAPPC6AO75865 159 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 IFNGR1P15260 489 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 CPEP16870 476 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 GDF1P27539 372 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 VBP1P61758 197 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 POU3F1Q03052 451 aaPredicted RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 ACSM1Q08AH1 577 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 LSAMPQ13449 338 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 TIMM50Q3ZCQ8 353 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 SLC35D2Q76EJ3 337 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 PHC2Q8IXK0 858 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 MDS2Q8NDY4 140 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 SPRYD4Q8WW59 207 aaPredicted RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 KCNE4Q8WWG9 221 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 TIMP4Q99727 224 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 OR2B2Q9GZK3 357 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 RNF32Q9H0A6 362 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 ZNF552Q9H707 407 aaPredicted RBP19.35■□□□□ 0.69
USP6NL-204ENST00000606752 B3GAT1Q9P2W7 334 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 NPIPA1Q9UND3 350 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 NOX1Q9Y5S8 564 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 FKBP7Q9Y680 259 aa19.35■□□□□ 0.69
USP6NL-204ENST00000606752 A0A1W2PQL4 384 aaPredicted RBP19.34■□□□□ 0.69
USP6NL-204ENST00000606752 FAM171A2A8MVW0 826 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 SEC14L5O43304 696 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 TFP02787 698 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 SP1P08047 785 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 TPBGQ13641 420 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 MELKQ14680 651 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 FAM205BPQ63HN1 556 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 SLC25A25Q6KCM7 469 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 SMAP2Q8WU79 429 aaPredicted RBP19.34■□□□□ 0.69
USP6NL-204ENST00000606752 ASB10Q8WXI3 467 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 SLC39A7Q92504 469 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 HAS2Q92819 552 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 HES7Q9BYE0 225 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 NUAK2Q9H093 628 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 OR51E2Q9H255 320 aa19.34■□□□□ 0.69
USP6NL-204ENST00000606752 KLF13Q9Y2Y9 288 aaPredicted RBP19.34■□□□□ 0.69
USP6NL-204ENST00000606752 AQP7P3A6NL99 342 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 ZNF891A8MT65 544 aaPredicted RBP19.33■□□□□ 0.69
USP6NL-204ENST00000606752 ZNF182P17025 639 aaPredicted RBP19.33■□□□□ 0.69
USP6NL-204ENST00000606752 NAA10P41227 235 aaPredicted RBP19.33■□□□□ 0.69
USP6NL-204ENST00000606752 ZNF85Q03923 595 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 LIPKQ5VXJ0 399 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 TMEM225Q6GV28 225 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 NHLRC1Q6VVB1 395 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 ZBTB46Q86UZ6 589 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 SLC35F2Q8IXU6 374 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 ISG20L2Q9H9L3 353 aaKnown RBP19.33■□□□□ 0.69
USP6NL-204ENST00000606752 NDUFB11Q9NX14 153 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 B4GALT7Q9UBV7 327 aa19.33■□□□□ 0.69
USP6NL-204ENST00000606752 MED12Q93074 2177 aa19.33■□□□□ 0.68
USP6NL-204ENST00000606752 LOC102725191A0A1B0GVB3 256 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 SLC22A23A1A5C7 686 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 AKAP8O43823 692 aaKnown RBP19.32■□□□□ 0.68
USP6NL-204ENST00000606752 SELENOFO60613 162 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 EIF1BO60739 113 aaKnown RBP19.32■□□□□ 0.68
USP6NL-204ENST00000606752 PSMA1P25786 263 aaKnown RBP19.32■□□□□ 0.68
USP6NL-204ENST00000606752 CCL11P51671 97 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 NCS1P62166 190 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 H3F3AP84243 136 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 RUNX1T1Q06455 604 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 CDC20Q12834 499 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 WIPI1Q5MNZ9 446 aaPredicted RBP19.32■□□□□ 0.68
USP6NL-204ENST00000606752 UEVLDQ8IX04 471 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 ZNF511Q8NB15 262 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 KLHL15Q96M94 604 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 SFXN2Q96NB2 322 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 OXGR1Q96P68 337 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 BABAM2Q9NXR7 383 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 B9D1Q9UPM9 204 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 NME2P1O60361 137 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 NME2P22392 152 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 HCCSP53701 268 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 CSNK2A1P68400 391 aaPredicted RBP19.32■□□□□ 0.68
USP6NL-204ENST00000606752 LYPD4Q6UWN0 246 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms