RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TMEM27Q9HBJ8 222 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 GAR1Q9NY12 217 aaKnown RBP3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 HAO2Q9NYQ3 351 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 WWOXQ9NZC7 414 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 SPG21Q9NZD8 308 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 VSX1Q9NZR4 365 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 CALML5Q9NZT1 146 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 IL17CQ9P0M4 197 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 COX16Q9P0S2 106 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 DHCR7Q9UBM7 475 aaKnown RBP3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF69Q9UC07 566 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 CACFD1Q9UGQ2 172 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 A4GNTQ9UNA3 340 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 FAM96BQ9Y3D0 163 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 ATG4BQ9Y4P1 393 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 FLVCR1Q9Y5Y0 555 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 ETV7Q9Y603 341 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 HS3ST4Q9Y661 456 aa3.71□□□□□ -1.82
HMGB1P50-201ENST00000605814 DOCK6Q96HP0 2047 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A087X0M5 115 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TEX13DA0A0J9YY54 714 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A1B0GW64 132 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A1B0GX30 115 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A1W2PPE3 182 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SMIM30A4D0T7 59 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CDHR4A6H8M9 788 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 BTBD17A6NE02 478 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 POM121BA6NF01 834 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 UNC119BA6NIH7 251 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF724A8MTY0 619 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 A8MWP6 167 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TRDCB7Z8K6 153 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 FAM157AC9JC47 383 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ANHXE9PGG2 379 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TSTD3H0UI37 97 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 H7C1Q1 480 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 PYCARD-AS1I3L0S3 204 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 M0QZK8 103 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SULT2B1O00204 365 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 FOXE1O00358 373 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CLDN5O00501 218 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SCDO00767 359 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SURF4O15260 269 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TOX3O15405 576 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 MAGEB4O15481 346 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 FLRT2O43155 660 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 KLF4O43474 513 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 GMFGO60234 142 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 GPRIN2O60269 458 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CTNSO60931 367 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 GGCTO75223 188 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 NME6O75414 186 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SPDEFO95238 335 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 AIFM1O95831 613 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 MOCS2O96007 188 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 FGBP02675 491 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 GBAP04062 536 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ANXA2P07355 339 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 C8GP07360 202 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 IGFBP1P08833 259 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CSF1P09603 554 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 METTL15P1P0C7V9 234 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TXNP10599 105 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 LYL1P12980 280 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF35P13682 527 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TPT1P13693 172 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 MYOGP15173 224 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 EPCAMP16422 314 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF14P17017 642 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ATF1P18846 271 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TYMPP19971 482 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 TNFRSF1BP20333 461 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 NT5EP21589 574 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ACHEP22303 614 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 S100A2P29034 98 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 HOXA11P31270 313 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CTNNB1P35222 781 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 FEN1P39748 380 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 PPT1P50897 306 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CCR4P51679 360 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 DVL1P1P54792 670 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CDH11P55287 796 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 HSD17B7P56937 341 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 RGS8P57771 180 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 RAB8AP61006 207 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 HBA1P69905 142 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 RAE1P78406 368 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 MRPS21P82921 87 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 ACSM2AQ08AH3 577 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 NAE1Q13564 534 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 DDX39BQ13838 428 aaKnown RBP3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 CBFBQ13951 182 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 RHEBQ15382 184 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SYPL1Q16563 259 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 HAGHQ16775 308 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 C2orf68Q2NKX9 166 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 DEFB115Q30KQ5 88 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 GFOD2Q3B7J2 385 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLC25A35Q3KQZ1 300 aa3.7□□□□□ -1.82
HMGB1P50-201ENST00000605814 MESTQ5EB52 335 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms