RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 NPDC1Q9NQX5 325 aaPredicted RBP8.38□□□□□ -1.07
SQSTM1P1-201ENST00000603451 UPB1Q9UBR1 384 aa8.38□□□□□ -1.07
SQSTM1P1-201ENST00000603451 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CDH10Q9Y6N8 788 aa8.38□□□□□ -1.07
SQSTM1P1-201ENST00000603451 FREM1Q5H8C1 2179 aa8.38□□□□□ -1.07
SQSTM1P1-201ENST00000603451 C11orf98E9PRG8 122 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 IMPA2O14732 288 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 PTP4A3O75365 173 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 KRT33AO76009 404 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 TXNDC12O95881 172 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CD14P08571 375 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 PGA4P0DJD7 388 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 PGA3P0DJD8 388 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 IFNGR1P15260 489 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 FUT4P22083 530 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CBLP22681 906 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 SDHAP31040 664 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 SLC6A6P31641 620 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CCKARP32238 428 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 AQP2P41181 271 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 RPS6KA3P51812 740 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZNF133P52736 654 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 RPL27P61353 136 aaKnown RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 LSM11P83369 360 aaKnown RBP eCLIP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 KPNB1Q14974 876 aaKnown RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ACKR1Q16570 336 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 HIST3H3Q16695 136 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ARMC4Q5T2S8 1044 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 TSPO2Q5TGU0 170 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZNF627Q7L945 461 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 DMRTC2Q8IXT2 367 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CCDC36Q8IYA8 594 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 C20orf196Q8IYI0 205 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 UBE2J2Q8N2K1 259 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 PARP8Q8N3A8 854 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 GPR137CQ8N3F9 429 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 LRRC75AQ8NAA5 344 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 AQP11Q8NBQ7 271 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 NOXO1Q8NFA2 376 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR10G2Q8NGC3 310 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR52L1Q8NGH7 329 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR5K1Q8NHB7 308 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 MAGEE2Q8TD90 523 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 FAM222BQ8WU58 562 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ASB10Q8WXI3 467 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 STMN2Q93045 179 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CENPNQ96H22 339 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ALG12Q9BV10 488 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 GABARAPL1Q9H0R8 117 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 DENND2DQ9H6A0 471 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZNF556Q9HAH1 456 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 MCCC2Q9HCC0 563 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 SLC7A10Q9NS82 523 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 IL20Q9NYY1 176 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 BAIAP2Q9UQB8 552 aa8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 MAGED1Q9Y5V3 778 aaPredicted RBP8.37□□□□□ -1.07
SQSTM1P1-201ENST00000603451 TRAV27A0A087WT01 109 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 TUBAL3A6NHL2 446 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 TIPRLO75663 272 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 F13BP05160 661 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 HLA-DOBP13765 273 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 COX6B1P14854 86 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ACADSP16219 412 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 IL32P24001 234 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 HOXC12P31275 282 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 NTF4P34130 210 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 RPL4P36578 427 aaKnown RBP8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 CSNK1A1P48729 337 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 SELENOPP49908 381 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 BIDP55957 195 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 RFX4Q33E94 735 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 TIMM23BQ5SRD1 257 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 HMBOX1Q6NT76 420 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 FAM122BQ7Z309 247 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZDHHC13Q8IUH4 622 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 KDM8Q8N371 416 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZNF433Q8N7K0 673 aaPredicted RBP8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ARIH2OSQ8N7S6 290 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR9Q2Q8NGE9 314 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR6N1Q8NGY5 312 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR51A7Q8NH64 312 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZNF519Q8TB69 540 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 POLDIP3Q9BY77 421 aaKnown RBP8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 MRPL13Q9BYD1 178 aaKnown RBP8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ULBP2Q9BZM5 246 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR52D1Q9H346 318 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 NGBQ9NPG2 151 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 MED29Q9NX70 200 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 VNN3Q9NY84 501 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ZNF226Q9NYT6 803 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 GLTPQ9NZD2 209 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 GRHPRQ9UBQ7 328 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 POFUT2Q9Y2G5 429 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 AMDHD2Q9Y303 409 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 U3KQV3 271 aa8.36□□□□□ -1.07
SQSTM1P1-201ENST00000603451 ARPC4-TTLL3A0A0A6YYG9 625 aa8.35□□□□□ -1.07
SQSTM1P1-201ENST00000603451 SH3D21A4FU49 640 aa8.35□□□□□ -1.07
SQSTM1P1-201ENST00000603451 OR5H1A6NKK0 313 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms