RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ANKUB1A6NFN9 424 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 B4DXG7 233 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 CDK2AP1O14519 115 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PLA2G10O15496 165 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SSX4O60224 188 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 CDC40O60508 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
VRK3-223ENST00000601341 SERPINA3P01011 423 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 CCL3P10147 92 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SAGP10523 405 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 GP1BBP13224 206 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 WT1P19544 449 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 AZGP1P25311 298 aaKnown RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 CD79BP40259 229 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 CASRP41180 1078 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 MAP2K3P46734 347 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ACTA2P62736 377 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ACTG2P63267 376 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 OC90Q02509 493 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 GGTLC2Q14390 218 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TAB1Q15750 504 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ZNF362Q5T0B9 420 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 ATAD3CQ5T2N8 411 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PRAMEF20Q5VT98 475 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PLET1Q6UQ28 207 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PXKQ7Z7A4 578 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SYS1Q8N2H4 156 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PFN4Q8NHR9 129 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ENKURQ8TC29 256 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TMEM234Q8WY98 164 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PHYHIPQ92561 330 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ST6GAL2Q96JF0 529 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 NEDD4LQ96PU5 975 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 IFT27Q9BW83 186 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SLC19A3Q9BZV2 496 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ADAM19Q9H013 955 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 C11orf54Q9H0W9 315 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 C12orf10Q9HB07 376 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 MEPEQ9NQ76 525 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 CYSLTR2Q9NS75 346 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TAS2R10Q9NYW0 307 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 IL20RAQ9UHF4 553 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 KLHL21Q9UJP4 597 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 POU2F3Q9UKI9 436 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ELOA3DA6NLF2 546 aaPredicted RBP10.56□□□□□ -0.72
VRK3-223ENST00000601341 KLK10O43240 276 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 IDH3BO43837 385 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 NTN1O95631 604 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 P04436 131 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 S100A1P23297 94 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 MYL9P24844 172 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 MST1P26927 711 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 TACR3P29371 465 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 QPRTQ15274 297 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 TOMM34Q15785 309 aaPredicted RBP10.56□□□□□ -0.72
VRK3-223ENST00000601341 ELOA3BQ3SY89 546 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 SPATC1Q76KD6 591 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 TRILQ7L0X0 811 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 MDGA2Q7Z553 956 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 ATG4DQ86TL0 474 aaPredicted RBP10.56□□□□□ -0.72
VRK3-223ENST00000601341 OAFQ86UD1 273 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 LIX1LQ8IVB5 337 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 ELOA3Q8NG57 546 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 ST8SIA1Q92185 356 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 UTP23Q9BRU9 249 aaKnown RBP10.56□□□□□ -0.72
VRK3-223ENST00000601341 RNF32Q9H0A6 362 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 PTGES2Q9H7Z7 377 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 ANKRD10Q9NXR5 420 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 MED11Q9P086 117 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 COMMD3Q9UBI1 195 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 DCHS1Q96JQ0 3298 aa10.56□□□□□ -0.72
VRK3-223ENST00000601341 FREM2Q5SZK8 3169 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 TRAV1-2A0A0B4J238 106 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 FAM183AA6NL82 134 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 CENPXA8MT69 81 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 HPGDSO60760 199 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 TALDO1P37837 337 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 LGALS3BPQ08380 585 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 ZFP69Q49AA0 526 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 SLC35D3Q5M8T2 416 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 DMKNQ6E0U4 476 aaPredicted RBP10.55□□□□□ -0.72
VRK3-223ENST00000601341 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 VASH1Q7L8A9 365 aaPredicted RBP10.55□□□□□ -0.72
VRK3-223ENST00000601341 GRINAQ7Z429 371 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 PLCZ1Q86YW0 608 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 ZFP41Q8N8Y5 198 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 OR4K17Q8NGC6 315 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 OR13C2Q8NGS9 318 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 OR2T27Q8NH04 317 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
VRK3-223ENST00000601341 HAVCR2Q8TDQ0 301 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 SLC7A6Q92536 515 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 NTNG2Q96CW9 530 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 CMTM3Q96MX0 182 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 MARVELD1Q9BSK0 173 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 RERGLQ9H628 205 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 ADGRL4Q9HBW9 690 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 LRFN1Q9P244 771 aa10.55□□□□□ -0.72
VRK3-223ENST00000601341 N6AMT1Q9Y5N5 214 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms