RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	RPS4X	P62701	263 aa	Known RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	ARF1	P84077	181 aa	Known RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	PRKCD	Q05655	676 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	KEAP1	Q14145	624 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	ACKR1	Q16570	336 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	CEACAM16	Q2WEN9	425 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	TBRG1	Q3YBR2	411 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	ANKRD16	Q6P6B7	361 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	TBPL2	Q6SJ96	375 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	KLHL24	Q6TFL4	600 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	MEX3D	Q86XN8	651 aa	Known RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	RNF113B	Q8IZP6	322 aa	Known RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	LILRB1	Q8NHL6	650 aa	Predicted RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	MOSPD2	Q8NHP6	518 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	ADAD1	Q96M93	576 aa	Known RBP	12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	PIP5K1A	Q99755	562 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	OBP2B	Q9NPH6	170 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	HIF3A	Q9Y2N7	669 aa		12.5	□□□□□ -0.41
PSMC4-205	ENST00000601194	NPIPB13	A6NJU9	1138 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	NPIPB4	C9JG80	1138 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	HS3ST1	O14792	307 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	F13B	P05160	661 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	ITGA2	P17301	1181 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	CSNK1A1	P48729	337 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	PRPS1	P60891	318 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	FHL1	Q13642	323 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	MELK	Q14680	651 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	FGD3	Q5JSP0	725 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	ADAM5	Q6NVV9	412 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	PODNL1	Q6PEZ8	512 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	KLHL17	Q6TDP4	642 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	TMEM108	Q6UXF1	575 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	CYP2R1	Q6VVX0	501 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	C20orf204	Q6ZNR8	217 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	KBTBD8	Q8NFY9	601 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	OR6N1	Q8NGY5	312 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	TMEM54	Q969K7	222 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	SLC25A44	Q96H78	314 aa	Predicted RBP	12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	FUZ	Q9BT04	418 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	ULBP2	Q9BZM5	246 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	MUC13	Q9H3R2	512 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	IL1RAP	Q9NPH3	570 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	B3GAT2	Q9NPZ5	323 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	INIP	Q9NRY2	104 aa		12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.49	□□□□□ -0.41
PSMC4-205	ENST00000601194		A0A096LPE4	126 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	TRBV4-1	A0A0J9YWV2	114 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194		A0A1W2PPZ6	126 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194		A0A1W2PRG6	482 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ZNF99	A8MXY4	864 aa	Predicted RBP	12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	EFCAB9	A8MZ26	197 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	SHISA9	B4DS77	424 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	CDC42EP2	O14613	210 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ABCD4	O14678	606 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	BCL10	O95999	233 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	WNT11	O96014	354 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	PGA4	P0DJD7	388 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	PGA3	P0DJD8	388 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	SAG	P10523	405 aa	Predicted RBP	12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	PTAFR	P25105	342 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	CD40	P25942	277 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	GPR4	P46093	362 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	DAP3	P51398	398 aa	Known RBP	12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ART1	P52961	327 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	RUNX1T1	Q06455	604 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	TRIM25	Q14258	630 aa	Known RBP	12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	LAPTM4A	Q15012	233 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	SEC23B	Q15437	767 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	DEFB113	Q30KQ7	82 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	MTX3	Q5HYI7	312 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	LCN8	Q6JVE9	175 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	TMPRSS11F	Q6ZWK6	438 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ZNF611	Q8N823	705 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	OR13C2	Q8NGS9	318 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	IGFBPL1	Q8WX77	278 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ASB10	Q8WXI3	467 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	AKAP1	Q92667	903 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	NEUROG1	Q92886	237 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ZNF566	Q969W8	418 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	MCUR1	Q96AQ8	359 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	CLPTM1L	Q96KA5	538 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	ALPK1	Q96QP1	1244 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	SEPHS2	Q99611	448 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	FOXC2	Q99958	501 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	C1QTNF6	Q9BXI9	259 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	CXXC4	Q9H2H0	198 aa		12.48	□□□□□ -0.41
PSMC4-205	ENST00000601194	HIVEP1	P15822	2718 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	TRAV27	A0A087WT01	109 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	TCRBV5S2	A0A599	114 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	MCIDAS	D6RGH6	385 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194		M0R1B8	84 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	SEC14L2	O76054	403 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	IGHG1	P01857	330 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	FABP3	P05413	133 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	HOXB1	P14653	301 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	LIMS1	P48059	325 aa		12.47	□□□□□ -0.41
PSMC4-205	ENST00000601194	SLC9A3	P48764	834 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms