RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IGHV2OR16-5A0A0B4J2B6 119 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 BBIP1A8MTZ0 92 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 LRRN3E7EW58 273 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 OR6A2O95222 327 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 LYPD3O95274 346 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 THY1P04216 161 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
VRK3-221ENST00000600284 CAPZA2P47755 286 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 IDH3GP51553 393 aaPredicted RBP13.7□□□□□ -0.22
VRK3-221ENST00000600284 CAMK2DQ13557 499 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 GSG1Q2KHT4 349 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 ZNF813Q6ZN06 617 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 SLC46A3Q7Z3Q1 461 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 MDP1Q86V88 176 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 CALHM3Q86XJ0 350 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 RBM45Q8IUH3 476 aaKnown RBP13.7□□□□□ -0.22
VRK3-221ENST00000600284 OR4D11Q8NGI4 311 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 OR6N1Q8NGY5 312 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 OR6X1Q8NH79 312 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 LRRC58Q96CX6 371 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 SORCS2Q96PQ0 1159 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 ECSITQ9BQ95 431 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 ULBP2Q9BZM5 246 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 POLR2J2Q9GZM3 115 aaKnown RBP13.7□□□□□ -0.22
VRK3-221ENST00000600284 POLR2J3Q9H1A7 115 aaKnown RBP13.7□□□□□ -0.22
VRK3-221ENST00000600284 SEC61A2Q9H9S3 476 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 NANSQ9NR45 359 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 TMEM160Q9NX00 188 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 TAS2R5Q9NYW4 299 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 SLC7A7Q9UM01 511 aa13.7□□□□□ -0.22
VRK3-221ENST00000600284 ARFGEF3Q5TH69 2177 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 ANK3Q12955 4377 aaKnown RBP13.69□□□□□ -0.22
VRK3-221ENST00000600284 LOC390937A0A1W2PQ73 354 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 ZNF503-AS2A6NEH8 195 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 VWC2LB2RUY7 222 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 ENTPD5O75356 428 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 CH25HO95992 272 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 HIST1H2ABP04908 130 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 CELA3BP08861 270 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 NPR2P20594 1047 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 CSNK1A1P48729 337 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 ARFIP2P53365 341 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 NPRL3Q12980 569 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 MAPRE2Q15555 327 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 MMEL1Q495T6 779 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 C6orf52Q5T4I8 152 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 ERICH5Q6P6B1 374 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 VHLLQ6RSH7 139 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 WDR88Q6ZMY6 472 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 SLC35D2Q76EJ3 337 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 HIST3H2AQ7L7L0 130 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 PIWIL3Q7Z3Z3 882 aaKnown RBP13.69□□□□□ -0.22
VRK3-221ENST00000600284 ZNF540Q8NDQ6 660 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 VANGL1Q8TAA9 524 aaPredicted RBP13.69□□□□□ -0.22
VRK3-221ENST00000600284 HIST1H2ACQ93077 130 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 FOXB1Q99853 325 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 VRK1Q99986 396 aaPredicted RBP13.69□□□□□ -0.22
VRK3-221ENST00000600284 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 RAB1BQ9H0U4 201 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 FBXL3Q9UKT7 428 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 BAG5Q9UL15 447 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
VRK3-221ENST00000600284 CHD3Q12873 2000 aaKnown RBP13.69□□□□□ -0.22
VRK3-221ENST00000600284 C11orf98E9PRG8 122 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 IGF2P01344 180 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 IFNA2P01563 188 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 IFNA14P01570 189 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 HLA-HP01893 362 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 ERCC1P07992 297 aaPredicted RBP13.68□□□□□ -0.22
VRK3-221ENST00000600284 ASAH2BP0C7U1 165 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 CD79AP11912 226 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 IFNGR1P15260 489 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 NR4A1P22736 598 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 THBS4P35443 961 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 CRYBA2P53672 197 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 BIDP55957 195 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
VRK3-221ENST00000600284 KLF10Q13118 480 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 DAG1Q14118 895 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 CYB5R2Q6BCY4 276 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 MYPOPQ86VE0 399 aaPredicted RBP13.68□□□□□ -0.22
VRK3-221ENST00000600284 TMEM54Q969K7 222 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
VRK3-221ENST00000600284 ZNF75AQ96N20 296 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 DOK1Q99704 481 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 PRSS27Q9BQR3 290 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 GLTPQ9NZD2 209 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 SPEF1Q9Y4P9 236 aa13.68□□□□□ -0.22
VRK3-221ENST00000600284 SONP18583 2426 aaKnown RBP13.67□□□□□ -0.22
VRK3-221ENST00000600284 hCG_2039718K7EN88 272 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 FXYD1O00168 92 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 RNF13O43567 381 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 SERPINI2O75830 405 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 SEC14L2O76054 403 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 LY6HO94772 140 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 UBL3O95164 117 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 ZNF14P17017 642 aaPredicted RBP13.67□□□□□ -0.22
VRK3-221ENST00000600284 RBM34P42696 430 aaKnown RBP13.67□□□□□ -0.22
VRK3-221ENST00000600284 NR4A2P43354 598 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms