RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 NUF2Q9BZD4 464 aa12.77□□□□□ -0.37
XRCC1-209ENST00000599693 SLC6A13Q9NSD5 602 aa12.77□□□□□ -0.37
XRCC1-209ENST00000599693 AIG1Q9NVV5 245 aa12.77□□□□□ -0.37
XRCC1-209ENST00000599693 RPS6KB2Q9UBS0 482 aa12.77□□□□□ -0.37
XRCC1-209ENST00000599693 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.77□□□□□ -0.37
XRCC1-209ENST00000599693 IFT52Q9Y366 437 aa12.77□□□□□ -0.37
XRCC1-209ENST00000599693 TRAV36DV7A0A075B6V5 113 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 A0A0G2JPF8 293 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HNRNPCL2B2RXH8 293 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HNRNPCL3B7ZW38 293 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 RFXANKO14593 260 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 TYROBPO43914 113 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 CDC14BO60729 498 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HNRNPCL1O60812 293 aaKnown RBP12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HPRP00739 348 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 FSHBP01225 129 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 IGHV2-5P01817 119 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HNRNPCL4P0DMR1 293 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HLA-DOBP13765 273 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 CRATP43155 626 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 RPL14P50914 215 aaKnown RBP12.76□□□□□ -0.37
XRCC1-209ENST00000599693 AQP5P55064 265 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 RAB39AQ14964 217 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 RGS7BPQ6MZT1 257 aaPredicted RBP12.76□□□□□ -0.37
XRCC1-209ENST00000599693 TMEM154Q6P9G4 183 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 NET1Q7Z628 596 aaPredicted RBP12.76□□□□□ -0.37
XRCC1-209ENST00000599693 TMEM19Q96HH6 336 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 SORT1Q99523 831 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 FOXB1Q99853 325 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 ULBP2Q9BZM5 246 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 C20orf27Q9GZN8 174 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 MEAF6Q9HAF1 191 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 NTN4Q9HB63 628 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 HINT3Q9NQE9 182 aaKnown RBP12.76□□□□□ -0.37
XRCC1-209ENST00000599693 DDX28Q9NUL7 540 aaKnown RBP12.76□□□□□ -0.37
XRCC1-209ENST00000599693 TAAR3PQ9P1P4 343 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 KLHL14Q9P2G3 628 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
XRCC1-209ENST00000599693 CMYA5Q8N3K9 4069 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 IGKV1D-42A0A075B6H8 117 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 WDR91A4D1P6 747 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 MS4A18H0YCH9 400 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 PRSS23O95084 383 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 NQO1P15559 274 aaKnown RBP12.75□□□□□ -0.37
XRCC1-209ENST00000599693 CBLP22681 906 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 GATA3P23771 443 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 SELENOVP59797 346 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 CCL8P80075 99 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 DEFA6Q01524 100 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 TEKQ02763 1124 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 ZP4Q12836 540 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 MS4A18Q3C1V0 323 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 WDFY1Q8IWB7 410 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 KIRREL3Q8IZU9 778 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 SNX33Q8WV41 574 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 SLC41A3Q96GZ6 507 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 ZBTB18Q99592 522 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 MED29Q9NX70 200 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 NKIRAS2Q9NYR9 191 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 HAO1Q9UJM8 370 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 PPIAL4AQ9Y536 164 aa12.75□□□□□ -0.37
XRCC1-209ENST00000599693 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 A0A087WUJ7 227 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 IGHV1-69-2A0A0G2JMI3 117 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 SLC22A23A1A5C7 686 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 CLPTM1O96005 669 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 SERPINA5P05154 406 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 FPR2P25090 351 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 CRYBB2P43320 205 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 SLC1A6P48664 564 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 KLF3P57682 345 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-209ENST00000599693 CAMK2DQ13557 499 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 TREML4Q6UXN2 200 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 NHLRC1Q6VVB1 395 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 LSMEM1Q8N8F7 131 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 SCAIQ8N9R8 606 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 GLB1L3Q8NCI6 653 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-209ENST00000599693 OR6N1Q8NGY5 312 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 OR6S1Q8NH40 331 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 DNAJA4Q8WW22 397 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-209ENST00000599693 C22orf15Q8WYQ4 148 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.74□□□□□ -0.37
XRCC1-209ENST00000599693 DVL3Q92997 716 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-209ENST00000599693 TXNDC15Q96J42 360 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 TSPAN32Q96QS1 320 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 C7orf69Q9H7B7 122 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 TPT1P8Q9HAU6 139 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 THUMPD1Q9NXG2 353 aaKnown RBP12.74□□□□□ -0.37
XRCC1-209ENST00000599693 OPN4Q9UHM6 478 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
XRCC1-209ENST00000599693 VWFP04275 2813 aa12.73□□□□□ -0.37
XRCC1-209ENST00000599693 ZNF726A6NNF4 738 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms