RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 HCN1O60741 890 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 TRAPPC6AO75865 159 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 CCNB2O95067 398 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 LYPD3O95274 346 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 ATP6V1G2O95670 118 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 RFPL3SP0C7P2 107 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 ZNF23P17027 643 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 MAGEA5P43359 124 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 TDGF1P3P51864 188 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 PMP22Q01453 160 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 RBPJQ06330 500 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 SLC34A1Q06495 639 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 SLC10A1Q14973 349 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 KRTCAP3Q53RY4 240 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 HMBOX1Q6NT76 420 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 SHQ1Q6PI26 577 aaKnown RBP9.28□□□□□ -0.92
SMG9-207ENST00000598860 ZNF730Q6ZMV8 503 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 OR4C15Q8NGM1 316 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 OR6S1Q8NH40 331 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 POC1BQ8TC44 478 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 TMEM239Q8WW34 195 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 DNAJC9Q8WXX5 260 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 DDIT4LQ96D03 193 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 SFXN2Q96NB2 322 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 PKP2Q99959 881 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 PSD2Q9BQI7 771 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 PRSS27Q9BQR3 290 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 C9orf16Q9BUW7 83 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 RHCGQ9UBD6 479 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 ERRFI1Q9UJM3 462 aaPredicted RBP9.28□□□□□ -0.92
SMG9-207ENST00000598860 TMED7Q9Y3B3 224 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 AP4B1Q9Y6B7 739 aa9.28□□□□□ -0.92
SMG9-207ENST00000598860 TRBV4-1A0A0J9YWV2 114 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 A0A1B0GUH1 482 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 SH3PXD2BA1X283 911 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 OR2M5A3KFT3 312 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 CASQ2O14958 399 aaPredicted RBP9.27□□□□□ -0.93
SMG9-207ENST00000598860 OR2T1O43869 369 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 AHSA1O95433 338 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 ACTL6AO96019 429 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 IGHG3P01860 377 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 THY1P04216 161 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 STSP08842 583 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 PEPDP12955 493 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 ANXA8P13928 327 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 MFSD13AQ14CX5 517 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 MICAQ29983 383 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 EXOC3L2Q2M3D2 409 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 PODNL1Q6PEZ8 512 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 YRDCQ86U90 279 aaKnown RBP9.27□□□□□ -0.93
SMG9-207ENST00000598860 ADGRG3Q86Y34 549 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 NKAIN4Q8IVV8 208 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 CDK20Q8IZL9 346 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 ICA1LQ8NDH6 482 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 OR10G2Q8NGC3 310 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 OR4K5Q8NGD3 323 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 OR52J3Q8NH60 311 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 NEIL3Q8TAT5 605 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 PIGXQ8TBF5 258 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 SLC7A13Q8TCU3 470 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 GIPC3Q8TF64 312 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 SPSB4Q96A44 273 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 KLHDC3Q9BQ90 382 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 FUZQ9BT04 418 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 POTEKPQ9BYX7 375 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 MS4A7Q9GZW8 240 aaPredicted RBP9.27□□□□□ -0.93
SMG9-207ENST00000598860 GABARAPL1Q9H0R8 117 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 VCX3BQ9H321 246 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 EXO5Q9H790 373 aa9.27□□□□□ -0.93
SMG9-207ENST00000598860 MRPS18AQ9NVS2 196 aaKnown RBP9.27□□□□□ -0.93
SMG9-207ENST00000598860 RPH3AQ9Y2J0 694 aaPredicted RBP9.27□□□□□ -0.93
SMG9-207ENST00000598860 PHF3Q92576 2039 aaKnown RBP9.27□□□□□ -0.93
SMG9-207ENST00000598860 MED12LQ86YW9 2145 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 DOCK7Q96N67 2140 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 A0A087WUU8 490 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 TRGV5A0A0B4J1U4 118 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 A0A1B0GVC2 190 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 TMEM72A0PK05 275 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 WIPF3A6NGB9 483 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 KRTAP9-7A8MTY7 169 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 NPIPA5E9PKD4 350 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 G3V2T6 193 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 LRRTM2O43300 516 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 OR10H3O60404 316 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 ADAP00813 363 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 MT-ATP6P00846 226 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 CSTBP04080 98 aaKnown RBP9.26□□□□□ -0.93
SMG9-207ENST00000598860 RFC3P40938 356 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 CHN2P52757 468 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 UGT2B15P54855 530 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 CTBP2P56545 445 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 B3GALT5-AS1P59052 145 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 FOXL1Q12952 345 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 BCL2A1Q16548 175 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 SYT14P1Q58G82 188 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 NHSL2Q5HYW2 709 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 PDSS1Q5T2R2 415 aa9.26□□□□□ -0.93
SMG9-207ENST00000598860 WDR88Q6ZMY6 472 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms