RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MSX1P28360 303 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 RPL27P61353 136 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 OXA1LQ15070 435 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 PLPPR5Q32ZL2 321 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 PRAMEF20Q5VT98 475 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 EEF1A1P5Q5VTE0 462 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 C5orf46Q6UWT4 87 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 IL20RBQ6UXL0 311 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 PLEKHG7Q6ZR37 379 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 LYSMD2Q8IV50 215 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 TIGD4Q8IY51 512 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 OR2M3Q8NG83 312 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 OR13C5Q8NGS8 318 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 OR2T4Q8NH00 348 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 ABHD4Q8TB40 342 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 M1APQ8TC57 530 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 THAP4Q8WY91 577 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 ABTB1Q969K4 478 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 COX4I2Q96KJ9 171 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 ABCB9Q9NP78 766 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 MRPL39Q9NYK5 338 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 CMAHPQ9Y471 501 aa15.35■□□□□ 0.05
SHKBP1-216ENST00000598201 SPTBN4Q9H254 2564 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 A0A1W2PNU3 283 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 OGG1O15527 345 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 OCM2P0CE71 109 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 OCMP0CE72 109 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 CD53P19397 219 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 PSMB10P40306 273 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 OR7A5Q15622 319 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 SLC16A9Q7RTY1 509 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 NR2C2APQ86WQ0 139 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 WDSUB1Q8N9V3 476 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 STRADBQ9C0K7 418 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 RNF32Q9H0A6 362 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 TXNIPQ9H3M7 391 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 SDHAF3Q9NRP4 125 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 FAIMQ9NVQ4 179 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 PADI1Q9ULC6 663 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 V9GYH0 126 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 A0A1W2PRG6 482 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 MS4A18H0YCH9 400 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 H3BML4 177 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 SC5DO75845 299 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 OR6A2O95222 327 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 CAPZA2P47755 286 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF41P51814 821 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 RAB15P59190 212 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 SIRPAP78324 504 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 CDK5R1Q15078 307 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 MS4A18Q3C1V0 323 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 GLYR1Q49A26 553 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 SLC25A53Q5H9E4 307 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF684Q5T5D7 378 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 STEAP3Q658P3 488 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 NDUFAF7Q7L592 441 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 OR5M1Q8NGP8 315 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 WDFY2Q96P53 400 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 CDCP1Q9H5V8 836 aa15.34■□□□□ 0.05
SHKBP1-216ENST00000598201 NSG1A0A0A6YYJ2 146 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 XKRYO14609 159 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 ZNF208O43345 1280 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 AKR7A3O95154 331 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 PSKH1P11801 424 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 F8A1P23610 371 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 SHC1P29353 583 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 RPS27P42677 84 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 GBX2P52951 348 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 C19orf57Q0VDD7 668 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 DNASE1L3Q13609 305 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 MELKQ14680 651 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 TRIM16LQ309B1 348 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 OTPQ5XKR4 325 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 C6orf15Q6UXA7 325 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 PPP1R32Q7Z5V6 425 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 OR6S1Q8NH40 331 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 MFSD8Q8NHS3 518 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 CT55Q8WUE5 264 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 RNF166Q96A37 237 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 MRGPRX4Q96LA9 322 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 KCNN2Q9H2S1 579 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 WDR76Q9H967 626 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 TCFL5Q9UL49 500 aa15.33■□□□□ 0.04
SHKBP1-216ENST00000598201 PRSS37A4D1T9 235 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 DLGAP3O95886 979 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 IGHMP01871 453 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 TFPIP10646 304 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 TCN2P20062 427 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 GDI2P50395 445 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 ZNF181Q2M3W8 571 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 ZMAT1Q5H9K5 638 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 TMPRSS7Q7RTY8 843 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 CEACAM19Q7Z692 300 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 CDC20BQ86Y33 519 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 WDFY1Q8IWB7 410 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 SMIM19Q96E16 107 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 FOXN4Q96NZ1 517 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 TAAR9Q96RI9 348 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 ATF6BQ99941 703 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 CPNE5Q9HCH3 593 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms