RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MDH1P40925 334 aaKnown RBP13.09□□□□□ -0.31
LIG1-215ENST00000597901 EFNA4P52798 201 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 BIDP55957 195 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 HGFACQ04756 655 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 SLC35D2Q76EJ3 337 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 HIST3H2AQ7L7L0 130 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 MDP1Q86V88 176 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 OR4F15Q8NGB8 312 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 HIST1H2ACQ93077 130 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 MEPEQ9NQ76 525 aaPredicted RBP13.09□□□□□ -0.31
LIG1-215ENST00000597901 CA10Q9NS85 328 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 RIMS3Q9UJD0 308 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 CAPN7Q9Y6W3 813 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 KPNA4O00629 521 aaPredicted RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 SLC22A2O15244 555 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 SHOX2O60902 331 aaPredicted RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 OR4A8P0C604 315 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 ASAH2BP0C7U1 165 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 FUT1P19526 365 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 CAPZA2P47755 286 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 OR1E2P47887 323 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 IDH3GP51553 393 aaPredicted RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 PIN1Q13526 163 aaPredicted RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 VHLLQ6RSH7 139 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 CLEC2AQ6UVW9 174 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 ZNF627Q7L945 461 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 MYPOPQ86VE0 399 aaPredicted RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 OR6X1Q8NH79 312 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 RP9Q8TA86 221 aaKnown RBP13.08□□□□□ -0.32
LIG1-215ENST00000597901 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 ULBP2Q9BZM5 246 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 ARMCX1Q9P291 453 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 ZNF229Q9UJW7 825 aa13.08□□□□□ -0.32
LIG1-215ENST00000597901 VSTM5A8MXK1 200 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 B9A039 149 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 BLOC1S5-TXNDC5H3BN57 136 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 RNF13O43567 381 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 HLA-HP01893 362 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 MT-ND1P03886 318 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 CD79AP11912 226 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 THBS4P35443 961 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 CSNK1A1P48729 337 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 TAS2R41P59536 307 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 PIGFQ07326 219 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 CYBRD1Q53TN4 286 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 LRFN4Q6PJG9 635 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 ZNF525Q8N782 197 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 POU5F2Q8N7G0 328 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 NUP37Q8NFH4 326 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 OR2T12Q8NG77 320 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 NANOS1Q8WY41 292 aaKnown RBP13.07□□□□□ -0.32
LIG1-215ENST00000597901 RCN3Q96D15 328 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
LIG1-215ENST00000597901 POLR2J3Q9H1A7 115 aaKnown RBP13.07□□□□□ -0.32
LIG1-215ENST00000597901 MED4Q9NPJ6 270 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 CMTM6Q9NX76 183 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 GLTPQ9NZD2 209 aa13.07□□□□□ -0.32
LIG1-215ENST00000597901 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 FAM220BPB1ANY3 271 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 GPRIN2O60269 458 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 CCDC22O60826 627 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 LY6HO94772 140 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 OR5F1O95221 314 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 BCL10O95999 233 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 UMPSP11172 480 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 COX4I1P13073 169 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 SNRPD2P62316 118 aaKnown RBP13.06□□□□□ -0.32
LIG1-215ENST00000597901 RAB1AP62820 205 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 SELENOWP63302 87 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 NPRL3Q12980 569 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 EFNB3Q15768 340 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 SLC46A3Q7Z3Q1 461 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 SLC15A3Q8IY34 581 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 MICU2Q8IYU8 434 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 TMEM255BQ8WV15 326 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 FAM168AQ92567 244 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 SLC25A44Q96H78 314 aaPredicted RBP13.06□□□□□ -0.32
LIG1-215ENST00000597901 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 FOXB1Q99853 325 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 AP3M1Q9Y2T2 418 aa13.06□□□□□ -0.32
LIG1-215ENST00000597901 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
LIG1-215ENST00000597901 A0A096LNT2 108 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 TMEM129A0AVI4 362 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 PDE5AO76074 875 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 THRBP10828 461 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 B4GALT1P15291 398 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 NPR2P20594 1047 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 RBM34P42696 430 aaKnown RBP13.05□□□□□ -0.32
LIG1-215ENST00000597901 UGT2B15P54855 530 aa13.05□□□□□ -0.32
LIG1-215ENST00000597901 GSG1Q2KHT4 349 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms