RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CAMK2DQ13557 499 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 P2RY6Q15077 328 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 CARD17Q5XLA6 110 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 FAM205BPQ63HN1 556 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 HMBOX1Q6NT76 420 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 ZNF620Q6ZNG0 422 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 HIPK1Q86Z02 1210 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 HS3ST5Q8IZT8 346 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 GPR137CQ8N3F9 429 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 ASB10Q8WXI3 467 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 GTPBP3Q969Y2 492 aaKnown RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 CENPNQ96H22 339 aaPredicted RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 SLC25A44Q96H78 314 aaPredicted RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 LRR1Q96L50 414 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 GPX7Q96SL4 187 aaPredicted RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 ZNF556Q9HAH1 456 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 B3GAT2Q9NPZ5 323 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 A6NIZ1 184 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ZNF587BE7ETH6 402 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 C19orf84I3L1E1 186 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 IGHG1P01857 330 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ANXA8P13928 327 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ZNF23P17027 643 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 PSMB1P20618 241 aaKnown RBP12.67□□□□□ -0.38
VRK3-213ENST00000597215 COX5AP20674 150 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 SLC6A6P31641 620 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 UGT2B10P36537 528 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 CSNK1A1P48729 337 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 FXYD6P3P58550 94 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 RAP1BP61224 184 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 RAP1AP62834 184 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ERVK-25P63136 954 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 COX10Q12887 443 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ITGADQ13349 1161 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 RFX4Q33E94 735 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 CD300LDQ6UXZ3 194 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 THSD4Q6ZMP0 1018 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 DPY19L2P2Q6ZN68 376 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 RASSF6Q6ZTQ3 369 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 CXorf67Q86X51 503 aaPredicted RBP12.67□□□□□ -0.38
VRK3-213ENST00000597215 ZDHHC13Q8IUH4 622 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 C20orf196Q8IYI0 205 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 SVOPLQ8N434 492 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 CLDN22Q8N7P3 220 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ATG16L2Q8NAA4 619 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 OR52L1Q8NGH7 329 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 OR6N1Q8NGY5 312 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 DNAJC9Q8WXX5 260 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 KISS1RQ969F8 398 aaPredicted RBP12.67□□□□□ -0.38
VRK3-213ENST00000597215 ZNF566Q969W8 418 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
VRK3-213ENST00000597215 PKP2Q99959 881 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 NIPSNAP1Q9BPW8 284 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 HDHD5Q9BXW7 423 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 SEMA6AQ9H2E6 1030 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 TAS2R16Q9NYV7 291 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 KIF17Q9P2E2 1029 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 PLEKHB1Q9UF11 243 aaPredicted RBP12.67□□□□□ -0.38
VRK3-213ENST00000597215 ZNF346Q9UL40 294 aaKnown RBP12.67□□□□□ -0.38
VRK3-213ENST00000597215 GPR52Q9Y2T5 361 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 CDH10Q9Y6N8 788 aa12.67□□□□□ -0.38
VRK3-213ENST00000597215 USP9YO00507 2555 aaPredicted RBP12.66□□□□□ -0.38
VRK3-213ENST00000597215 CENPBD1B2RD01 187 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 G3V2T6 193 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 PDLIM1O00151 329 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 UPK3AO75631 287 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 ACADSP16219 412 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 IGFBP2P18065 325 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 PRKACGP22612 351 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 IGHV1-2P23083 117 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 IL32P24001 234 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 MPGP29372 298 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 RPS6KA3P51812 740 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 CLRN1P58418 232 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 LGALS3BPQ08380 585 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 SFRP5Q5T4F7 317 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 GPR139Q6DWJ6 353 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 WDFY1Q8IWB7 410 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 NOXO1Q8NFA2 376 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 STEAP2Q8NFT2 490 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 SAMD8Q96LT4 415 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 ZNF570Q96NI8 536 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 TSPAN32Q96QS1 320 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 ENKD1Q9H0I2 346 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 OR10A4Q9H209 315 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 NRIP3Q9NQ35 241 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 GRHPRQ9UBQ7 328 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 IL20RAQ9UHF4 553 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
VRK3-213ENST00000597215 MAGED1Q9Y5V3 778 aaPredicted RBP12.66□□□□□ -0.38
VRK3-213ENST00000597215 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
VRK3-213ENST00000597215 M0R3G1 203 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms