RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 LOC102725191A0A1B0GVB3 256 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 A6NIZ1 184 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 AQP7P3A6NL99 342 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 H0YC42 278 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 SLC1A7O00341 560 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 XKRYO14609 159 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ARHGEF9O43307 516 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 VAMP5O95183 116 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 SYNGR4O95473 234 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 RENP00797 406 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 IGHG3P01860 377 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF708P17019 499 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF43P17038 809 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 CRHBPP24387 322 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 DAP3P51398 398 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 RAP1BP61224 184 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 RAP1AP62834 184 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 HSF1Q00613 529 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 INAQ16352 499 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ACKR1Q16570 336 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 KCTD21Q4G0X4 260 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF362Q5T0B9 420 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 NXNL2Q5VZ03 156 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 VASNQ6EMK4 673 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 PLBD1Q6P4A8 553 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 SLC35D2Q76EJ3 337 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 FAM122BQ7Z309 247 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 BCDIN3DQ7Z5W3 292 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 GPAT4Q86UL3 456 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ARIH2OSQ8N7S6 290 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 SLC37A3Q8NCC5 494 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF540Q8NDQ6 660 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 OR10D3Q8NH80 312 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 IPCEF1Q8WWN9 437 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 RFKQ969G6 155 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF566Q969W8 418 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 RASD2Q96D21 266 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 ADGRG7Q96K78 797 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 TSPAN32Q96QS1 320 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 AMBNQ9NP70 447 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 FANCFQ9NPI8 374 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 PAQR5Q9NXK6 330 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 SCOCQ9UIL1 159 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 NOX1Q9Y5S8 564 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 LIPGQ9Y5X9 500 aa11.67□□□□□ -0.54
SHKBP1-209ENST00000595803 RP1L1Q8IWN7 2480 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 CSMD2Q7Z408 3487 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 A0A1W2PNV4 684 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 WIPF3A6NGB9 483 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 FAM183AA6NL82 134 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 KDM4EB2RXH2 506 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 PRODHO43272 600 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 IGHMP01871 453 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 HLA-DOBP13765 273 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 IFNGR1P15260 489 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 CDKN2AP42771 156 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 P2RY4P51582 365 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 NUDT6P53370 316 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 CLDN18P56856 261 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 H3F3AP84243 136 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 LGALS3BPQ08380 585 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 KLRB1Q12918 225 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 KRR1Q13601 381 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 CRMP1Q14194 572 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 NADK2Q4G0N4 442 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 AADACL4Q5VUY2 407 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 TMEM154Q6P9G4 183 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 GID4Q8IVV7 300 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 SDR9C7Q8NEX9 313 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 GGHQ92820 318 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 PTP4A1Q93096 173 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 MYDGFQ969H8 173 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 PNPLA2Q96AD5 504 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 TXNDC15Q96J42 360 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 TAAR6Q96RI8 345 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 TIMP4Q99727 224 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 SRXN1Q9BYN0 137 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 PRRG4Q9BZD6 226 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 OR51V1Q9H2C8 321 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 HINT3Q9NQE9 182 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 PSORS1C1Q9UIG5 152 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 CAMK2AQ9UQM7 478 aa11.66□□□□□ -0.54
SHKBP1-209ENST00000595803 APCP25054 2843 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 A0A087WXM4 84 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 IGHV3-15A0A0B4J1V0 119 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 IRGMA1A4Y4 181 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 EFCAB10A6NFE3 127 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
SHKBP1-209ENST00000595803 CLCA1A8K7I4 914 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms