RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 FXYD1O00168 92 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 MRASO14807 208 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 GPRIN2O60269 458 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 PDE5AO76074 875 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 LY6HO94772 140 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 CSF3P09919 207 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 IFNGR1P15260 489 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 HGFACQ04756 655 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 MAPRE2Q15555 327 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 REP15Q6BDI9 236 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 CGB2Q6NT52 195 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 ZNF813Q6ZN06 617 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 MYPOPQ86VE0 399 aaPredicted RBP20.37■□□□□ 0.85
LSM4-204ENST00000594828 WDFY1Q8IWB7 410 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 NUP37Q8NFH4 326 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 IL17RDQ8NFM7 739 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 ULBP2Q9BZM5 246 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 SLC19A3Q9BZV2 496 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 YAE1D1Q9NRH1 226 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 B3GNT2Q9NY97 397 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 TAS2R5Q9NYW4 299 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 SH3GLB1Q9Y371 365 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 TLN2Q9Y4G6 2542 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 A0A096LNT2 108 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 LOC100653049A0A140TA62 436 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 KPNA4O00629 521 aaPredicted RBP20.36■□□□□ 0.85
LSM4-204ENST00000594828 KRT34O76011 436 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 HIST1H2ABP04908 130 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 BIDP55957 195 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 LOXL1Q08397 574 aaPredicted RBP20.36■□□□□ 0.85
LSM4-204ENST00000594828 ZP4Q12836 540 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 HIST3H2AQ7L7L0 130 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 ZNF627Q7L945 461 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 SLC46A3Q7Z3Q1 461 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 LRRC17Q8N6Y2 441 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 C10orf105Q8TEF2 133 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 NANOS1Q8WY41 292 aaKnown RBP20.36■□□□□ 0.85
LSM4-204ENST00000594828 HIST1H2ACQ93077 130 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 SORCS2Q96PQ0 1159 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 TNFRSF13CQ96RJ3 184 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 VRK1Q99986 396 aaPredicted RBP20.36■□□□□ 0.85
LSM4-204ENST00000594828 ZNF426Q9BUY5 554 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 ZNF229Q9UJW7 825 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 BAG5Q9UL15 447 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 FKBP7Q9Y680 259 aa20.36■□□□□ 0.85
LSM4-204ENST00000594828 IGHV2OR16-5A0A0B4J2B6 119 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 RNF13O43567 381 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 HLA-HP01893 362 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 CD79AP11912 226 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 CSNK1A1P48729 337 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 EFNB3Q15768 340 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 GSG1Q2KHT4 349 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 ERICH5Q6P6B1 374 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 SLC35D2Q76EJ3 337 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 CARM1Q86X55 608 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 PCYOX1LQ8NBM8 494 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 OR6X1Q8NH79 312 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 ZNF583Q96ND8 569 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 PRSS27Q9BQR3 290 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 ZNF442Q9H7R0 627 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 GID8Q9NWU2 228 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 ADAM21Q9UKJ8 722 aa20.35■□□□□ 0.85
LSM4-204ENST00000594828 KIAA1324LA8MWY0 1029 aaPredicted RBP20.34■□□□□ 0.85
LSM4-204ENST00000594828 IFNA14P01570 189 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 UMPSP11172 480 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 B4GALT1P15291 398 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 THBS4P35443 961 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 PIGFQ07326 219 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 TMEM249Q2WGJ8 235 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 C10orf82Q8WW14 230 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 FOXB1Q99853 325 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 PLK3Q9H4B4 646 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 ZNF446Q9NWS9 450 aa20.34■□□□□ 0.85
LSM4-204ENST00000594828 ABCA2Q9BZC7 2435 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 ASAH2BP0C7U1 165 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 NPR2P20594 1047 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 PDLIM4P50479 330 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 TAS2R41P59536 307 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 GUCY1A3Q02108 690 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 ANKS4BQ8N8V4 417 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 TMEM54Q969K7 222 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 MEPEQ9NQ76 525 aaPredicted RBP20.33■□□□□ 0.85
LSM4-204ENST00000594828 GLTPQ9NZD2 209 aa20.33■□□□□ 0.85
LSM4-204ENST00000594828 FBXO9Q9UK97 447 aaPredicted RBP20.33■□□□□ 0.85
LSM4-204ENST00000594828 ARFGEF3Q5TH69 2177 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 A8MV72 311 aaPredicted RBP20.32■□□□□ 0.84
LSM4-204ENST00000594828 TNFRSF1BP20333 461 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 DAG1Q14118 895 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 DEF8Q6ZN54 512 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 ZNF566Q969W8 418 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 SLC25A44Q96H78 314 aaPredicted RBP20.32■□□□□ 0.84
LSM4-204ENST00000594828 POLR2J2Q9GZM3 115 aaKnown RBP20.32■□□□□ 0.84
LSM4-204ENST00000594828 POLR2J3Q9H1A7 115 aaKnown RBP20.32■□□□□ 0.84
LSM4-204ENST00000594828 DENND2DQ9H6A0 471 aaPredicted RBP20.32■□□□□ 0.84
LSM4-204ENST00000594828 NOX3Q9HBY0 568 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 CAPN7Q9Y6W3 813 aa20.32■□□□□ 0.84
LSM4-204ENST00000594828 ABCA1O95477 2261 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 BLOC1S5-TXNDC5H3BN57 136 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 hCG_2039718K7EN88 272 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 SHOX2O60902 331 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms