RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 LAPTM4AQ15012 233 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 SEC23BQ15437 767 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 ZBED5Q49AG3 693 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 FBXW10Q5XX13 1052 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 ALKBH3Q96Q83 286 aaPredicted RBP22.65■■□□□ 1.22
TRIM28-204ENST00000594806 POLDIP3Q9BY77 421 aaKnown RBP22.65■■□□□ 1.22
TRIM28-204ENST00000594806 GPR35Q9HC97 309 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 OBP2BQ9NPH6 170 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 PRR14LQ5THK1 2151 aa22.65■■□□□ 1.22
TRIM28-204ENST00000594806 DEFB108AA8MXU0 73 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 HRGP04196 525 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 F13BP05160 661 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 HOXB1P14653 301 aaPredicted RBP22.64■■□□□ 1.21
TRIM28-204ENST00000594806 HOXC12P31275 282 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 GPR4P46093 362 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 LIMS1P48059 325 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 FOXG1P55316 489 aaPredicted RBP22.64■■□□□ 1.21
TRIM28-204ENST00000594806 CAMK2DQ13557 499 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 PPA1Q15181 289 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 WFDC8Q8IUA0 241 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 ADGRG5Q8IZF4 528 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 OR6N1Q8NGY5 312 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 MOSPD2Q8NHP6 518 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 ZNF566Q969W8 418 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 FAM46AQ96IP4 442 aaKnown RBP22.64■■□□□ 1.21
TRIM28-204ENST00000594806 CLEC4MQ9H2X3 399 aaPredicted RBP22.64■■□□□ 1.21
TRIM28-204ENST00000594806 TXNIPQ9H3M7 391 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 YY1AP1Q9H869 796 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 AMDHD2Q9Y303 409 aa22.64■■□□□ 1.21
TRIM28-204ENST00000594806 MCIDASD6RGH6 385 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 KLF4O43474 513 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 CSNK1A1P48729 337 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 CBX1P83916 185 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 OR2T5Q6IEZ7 315 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 SPATA24Q86W54 205 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 OR2T29Q8NH02 315 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 OR51A7Q8NH64 312 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 MAGEE2Q8TD90 523 aaPredicted RBP22.63■■□□□ 1.21
TRIM28-204ENST00000594806 CANT1Q8WVQ1 401 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 TNFRSF13CQ96RJ3 184 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 MAGED1Q9Y5V3 778 aaPredicted RBP22.63■■□□□ 1.21
TRIM28-204ENST00000594806 LYVE1Q9Y5Y7 322 aa22.63■■□□□ 1.21
TRIM28-204ENST00000594806 TRAV27A0A087WT01 109 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 TCRBV3S1A0A5B6 114 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 TNFRSF11BO00300 401 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 CDC42EP2O14613 210 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 OR10H3O60404 316 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 IGHG1P01857 330 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 IGHMP01871 453 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 LGALS3BPQ08380 585 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 FHL1Q13642 323 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 ACKR1Q16570 336 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 C9orf135Q5VTT2 229 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 CARD17Q5XLA6 110 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 FAM205BPQ63HN1 556 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 ANKRD16Q6P6B7 361 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 LINGO2Q7L985 606 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 LRRC75AQ8NAA5 344 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 OR1K1Q8NGR3 316 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 OR13C2Q8NGS9 318 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 ASB10Q8WXI3 467 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 TMEM54Q969K7 222 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 CHID1Q9BWS9 393 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 REEP1Q9H902 201 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 CRLF2Q9HC73 371 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 SLC17A5Q9NRA2 495 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 GLTPQ9NZD2 209 aa22.62■■□□□ 1.21
TRIM28-204ENST00000594806 ABCA12Q86UK0 2595 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 ITPR2Q14571 2701 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 M0R3G1 203 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 PTP4A3O75365 173 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 WNT11O96014 354 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 NR2C1P13056 603 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 CTXN1P60606 82 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 CEACAM16Q2WEN9 425 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 KLHL24Q6TFL4 600 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 ASRGL1Q7L266 308 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 LURAP1Q96LR2 239 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 ULBP2Q9BZM5 246 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 ESRP2Q9H6T0 727 aaKnown RBP22.61■■□□□ 1.21
TRIM28-204ENST00000594806 MOV10Q9HCE1 1003 aaKnown RBP22.61■■□□□ 1.21
TRIM28-204ENST00000594806 EDARQ9UNE0 448 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 SIGLEC7Q9Y286 467 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 SLC25A15Q9Y619 301 aa22.61■■□□□ 1.21
TRIM28-204ENST00000594806 NOTCH2Q04721 2471 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 ZNF99A8MXY4 864 aaPredicted RBP22.6■■□□□ 1.21
TRIM28-204ENST00000594806 NDUFB2O95178 105 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 PGA4P0DJD7 388 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 PGA3P0DJD8 388 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 ACADSP16219 412 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 FPR3P25089 353 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 RPL27P61353 136 aaKnown RBP22.6■■□□□ 1.21
TRIM28-204ENST00000594806 MELKQ14680 651 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 ARMC4Q5T2S8 1044 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 C1orf94Q6P1W5 598 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 ZER1Q7Z7L7 766 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 MEX3DQ86XN8 651 aaKnown RBP22.6■■□□□ 1.21
TRIM28-204ENST00000594806 CCDC36Q8IYA8 594 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 FNDC8Q8TC99 324 aa22.6■■□□□ 1.21
TRIM28-204ENST00000594806 BCL2L2Q92843 193 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms