RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 A0A1B0GVL5 298 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 ERVV-1B6SEH8 477 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 NPIPA3F8WFD2 350 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 RNASEK-C17orf49H0YIS7 233 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 OR10H3O60404 316 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 NEBLO76041 1014 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 GOT2P00505 430 aaKnown RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 TIMP1P01033 207 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 IFNA14P01570 189 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 PIGRP01833 764 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 DCNP07585 359 aaKnown RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 HIST1H2AGP0C0S8 130 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SP9P0CG40 484 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SLC35E2BP0CK96 405 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SLC35E2P0CK97 266 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 AOC1P19801 751 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 STOMP27105 288 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 HMOX2P30519 316 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 NDST2P52849 883 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 ADARB1P78563 741 aaKnown RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SIGLEC14Q08ET2 396 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SLAMF1Q13291 335 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 ILKQ13418 452 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 CRMP1Q14194 572 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 GRB14Q14449 540 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 CAMK4Q16566 473 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 PTPN20Q4JDL3 420 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 C6orf183Q5T699 404 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 LIPNQ5VXI9 398 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 OR2A2Q6IF42 318 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 DHRS11Q6UWP2 260 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 GDPGP1Q6ZNW5 385 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 UTS2BQ765I0 119 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 H2BFWTQ7Z2G1 175 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 MFSD6LQ8IWD5 586 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 IQCKQ8N0W5 287 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF444Q8N0Y2 327 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 FBXL16Q8N461 479 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 NECAP1Q8NC96 275 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 C19orf18Q8NEA5 215 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 OR5AU1Q8NGC0 362 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 OR52B6Q8NGF0 335 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 OR1L4Q8NGR5 311 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 FAM222BQ8WU58 562 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 UBTD2Q8WUN7 234 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SMPDL3AQ92484 453 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 TAF15Q92804 592 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 HIST1H2ACQ93077 130 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 RAD51AP1Q96B01 352 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 TMEM45BQ96B21 275 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 TESK2Q96S53 571 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 NAPGQ99747 312 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SLC30A2Q9BRI3 323 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 C7orf50Q9BRJ6 194 aaKnown RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 PARD6BQ9BYG5 372 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 GANQ9H2C0 597 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 DPEP2Q9H4A9 486 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 TRIM45Q9H8W5 580 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 MARCH7Q9H992 704 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 C3orf14Q9HBI5 128 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 SLC17A7Q9P2U7 560 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 IKZF2Q9UKS7 526 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 ATG4BQ9Y4P1 393 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 CSDC2Q9Y534 153 aaKnown RBP4.03□□□□□ -1.76
SMAD4-216ENST00000593223 LRRC42Q9Y546 428 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 KLK4Q9Y5K2 254 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 LOC400499M0QZD8 3231 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 IGF2RP11717 2491 aa4.03□□□□□ -1.76
SMAD4-216ENST00000593223 UBR5O95071 2799 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 NUP98P52948 1817 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 ZMYM6O95789 1325 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SALL1Q9NSC2 1324 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 MAPK8IP3Q9UPT6 1336 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 LAMA5O15230 3695 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 hCG_38984A0A1B0GV85 526 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 BCLAF3A2AJT9 711 aaKnown RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 TMEM213A2RRL7 107 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF840PA6NDX5 716 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 E7EWF7 191 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 BTN3A3O00478 584 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 LIN7AO14910 233 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 RAB29O14966 203 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 GATCO43716 136 aaKnown RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 CIAO1O76071 339 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 RAB3DO95716 219 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 FADS2O95864 444 aaKnown RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 HMGN1P05114 100 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 RPLP0P05388 317 aaKnown RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SERPINE2P07093 398 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 POLR2EP19388 210 aaKnown RBP4.02□□□□□ -1.77
SMAD4-216ENST00000593223 RAB4AP20338 218 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 LAP3P28838 519 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 ACTR1BP42025 376 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 MAGEA2P43356 314 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 KIR3DL2P43630 455 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 NPBWR2P48146 333 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 SERPINB9P50453 376 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 HERV-K104P63124 156 aa4.02□□□□□ -1.77
SMAD4-216ENST00000593223 REEP5Q00765 189 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms