RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 AGFG1P52594 562 aaKnown RBP12.05□□□□□ -0.48
VMP1-217ENST00000593168 CDH11P55287 796 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 CSNK2A1P68400 391 aaPredicted RBP12.05□□□□□ -0.48
VMP1-217ENST00000593168 H3F3AP84243 136 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 ZNF91Q05481 1191 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 MRPL49Q13405 166 aaKnown RBP12.05□□□□□ -0.48
VMP1-217ENST00000593168 CRMP1Q14194 572 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 EIF2S3LQ2VIR3 472 aaKnown RBP12.05□□□□□ -0.48
VMP1-217ENST00000593168 ESPNLQ6ZVH7 1005 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 MEPCEQ7L2J0 689 aaKnown RBP12.05□□□□□ -0.48
VMP1-217ENST00000593168 SPARTQ8N0X7 666 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 ARIH2OSQ8N7S6 290 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 TMEM99Q8N816 258 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 NPEPL1Q8NDH3 523 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 RELTQ969Z4 430 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 TSPAN32Q96QS1 320 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 RHNO1Q9BSD3 238 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 NAA11Q9BSU3 229 aaPredicted RBP12.05□□□□□ -0.48
VMP1-217ENST00000593168 CSAG2Q9Y5P2 127 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 HIVEP3Q5T1R4 2406 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 A0A1W2PRG6 482 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 SLC22A31A6NKX4 558 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 FAM183AA6NL82 134 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 AQP7P3A6NL99 342 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 FAM166BA8MTA8 275 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 JUNBP17275 347 aaPredicted RBP12.04□□□□□ -0.48
VMP1-217ENST00000593168 SLC2A5P22732 501 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 RFC3P40938 356 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 ALDH3B2P48448 385 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 SLC25A1P53007 311 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 RAC3P60763 192 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 RPL27P61353 136 aaKnown RBP12.04□□□□□ -0.48
VMP1-217ENST00000593168 PIGFQ07326 219 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 KRR1Q13601 381 aaKnown RBP12.04□□□□□ -0.48
VMP1-217ENST00000593168 BCL2A1Q16548 175 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 ACKR1Q16570 336 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 KLHL22Q53GT1 634 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 PDSS1Q5T2R2 415 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 ARMC4Q5T2S8 1044 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 RNLSQ5VYX0 342 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 NIPAL3Q6P499 406 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 NHLRC1Q6VVB1 395 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 GGNQ86UU5 652 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 JAZF1Q86VZ6 243 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 STX19Q8N4C7 294 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 SVOPQ8N4V2 548 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 SMPDL3BQ92485 455 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 RASD2Q96D21 266 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 ADGRG7Q96K78 797 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 OXGR1Q96P68 337 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 NMNAT3Q96T66 252 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 NMNAT2Q9BZQ4 307 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 VCX3AQ9NNX9 186 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 LUZP4Q9P127 313 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 WARS2Q9UGM6 360 aaKnown RBP12.04□□□□□ -0.48
VMP1-217ENST00000593168 RASD1Q9Y272 281 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 NOX1Q9Y5S8 564 aa12.04□□□□□ -0.48
VMP1-217ENST00000593168 RP1L1Q8IWN7 2480 aaPredicted RBP12.04□□□□□ -0.48
VMP1-217ENST00000593168 MED12Q93074 2177 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 OR6C68A6NDL8 312 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 A6NIZ1 184 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 VAMP5O95183 116 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 ACTL6AO96019 429 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 STSP08842 583 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 CELA3AP09093 270 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 POU3F2P20265 443 aaPredicted RBP12.03□□□□□ -0.48
VMP1-217ENST00000593168 ACVR1BP36896 505 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 CDKN2AP42771 156 aaKnown RBP12.03□□□□□ -0.48
VMP1-217ENST00000593168 MTNR1AP48039 350 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 STARP49675 285 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 DAP3P51398 398 aaKnown RBP12.03□□□□□ -0.48
VMP1-217ENST00000593168 CLDN20P56880 219 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 RAP1BP61224 184 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 RAP1AP62834 184 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 MVKQ03426 396 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 RAB40BQ12829 278 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 FAM205BPQ63HN1 556 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 TMEM225Q6GV28 225 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 LEG1Q6P5S2 330 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 Q6ZS92 163 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 KCTD8Q6ZWB6 473 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 ADCK1Q86TW2 530 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 UEVLDQ8IX04 471 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 KDM8Q8N371 416 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 Q8NA96 180 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 CYB561A3Q8NBI2 242 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 SDR9C7Q8NEX9 313 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 ZHX1-C8orf76Q96EF9 292 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 RNFT2Q96EX2 444 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 TEAD3Q99594 435 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 HCAR1Q9BXC0 346 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 CCDC90BQ9GZT6 254 aa12.03□□□□□ -0.48
VMP1-217ENST00000593168 ZDHHC11Q9H8X9 412 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms