RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 OR4Q3Q8NH05 313 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 OR6X1Q8NH79 312 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 ASB10Q8WXI3 467 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 EMC6Q9BV81 110 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 RASSF4Q9H2L5 321 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 Q9UFV3 132 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 RCE1Q9Y256 329 aa13.47□□□□□ -0.25
ATG4D-211ENST00000589753 PHF3Q92576 2039 aaKnown RBP13.46□□□□□ -0.25
ATG4D-211ENST00000589753 TEX13CA0A0J9YWL9 993 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 IDH3BO43837 385 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 TNFSF13O75888 250 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 ZNF432O94892 652 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 TXNDC12O95881 172 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 EPHA2P29317 976 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 NTF4P34130 210 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 OPRM1P35372 400 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 ACVR1BP36896 505 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 POLR2IP36954 125 aaKnown RBP13.46□□□□□ -0.25
ATG4D-211ENST00000589753 SELENOPP49908 381 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 SMSP52788 366 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 MYBPC1Q00872 1141 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 SNCBQ16143 134 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 PGGHGQ32M88 737 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 TMEM236Q5W0B7 351 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 MTFR2Q6P444 385 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 VWA1Q6PCB0 445 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 ZNF100Q8IYN0 542 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 ARIH2OSQ8N7S6 290 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 ZNF519Q8TB69 540 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 APH1AQ96BI3 265 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 SLC25A44Q96H78 314 aaPredicted RBP13.46□□□□□ -0.25
ATG4D-211ENST00000589753 Q96M85 177 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 OR2M2Q96R28 347 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 MBOAT4Q96T53 435 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 TEX12Q9BXU0 123 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 C12orf49Q9H741 205 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.25
ATG4D-211ENST00000589753 DOCK7Q96N67 2140 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 A6NIZ1 184 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 ZAR1LA6NP61 321 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 DLGAP1O14490 977 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 XKRYO14609 159 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 SLC43A1O75387 559 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 IL18BPO95998 194 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 IGHG1P01857 330 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 ACADSP16219 412 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 GRK5P34947 590 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 VHLP40337 213 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 RAP1BP61224 184 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 RAP1AP62834 184 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 CAMK2DQ13557 499 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
ATG4D-211ENST00000589753 MESTQ5EB52 335 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 SLC35F1Q5T1Q4 408 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 CARD17Q5XLA6 110 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 ACSM5Q6NUN0 579 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.45□□□□□ -0.26
ATG4D-211ENST00000589753 WDFY1Q8IWB7 410 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 TMEM123Q8N131 208 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 ZNF566Q969W8 418 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 RASD2Q96D21 266 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 GRIP2Q9C0E4 1043 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 ZNF629Q9UEG4 869 aaPredicted RBP13.45□□□□□ -0.26
ATG4D-211ENST00000589753 PROCRQ9UNN8 238 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 RNF6Q9Y252 685 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 CHD6Q8TD26 2715 aa13.45□□□□□ -0.26
ATG4D-211ENST00000589753 CENPBD1B2RD01 187 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 H0YJX3 145 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 DVL2O14641 736 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 TRMUO75648 421 aaKnown RBP13.44□□□□□ -0.26
ATG4D-211ENST00000589753 HMGN1P05114 100 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 PGA4P0DJD7 388 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 PGA3P0DJD8 388 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 HIST1H1CP16403 213 aaKnown RBP13.44□□□□□ -0.26
ATG4D-211ENST00000589753 BMP5P22003 454 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 OR3A2P47893 321 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 CLRN1P58418 232 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 ADORA2A-AS1P86434 159 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 RUNX1T1Q06455 604 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 BTLAQ7Z6A9 289 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 ADCK1Q86TW2 530 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 JAZF1Q86VZ6 243 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 MED12LQ86YW9 2145 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 CCDC71Q8IV32 467 aaPredicted RBP13.44□□□□□ -0.26
ATG4D-211ENST00000589753 ZNF555Q8NEP9 628 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 HDAC2Q92769 488 aaKnown RBP13.44□□□□□ -0.26
ATG4D-211ENST00000589753 MRPL13Q9BYD1 178 aaKnown RBP13.44□□□□□ -0.26
ATG4D-211ENST00000589753 PRRG3Q9BZD7 231 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 PLSCR4Q9NRQ2 329 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
ATG4D-211ENST00000589753 ERRFI1Q9UJM3 462 aaPredicted RBP13.44□□□□□ -0.26
ATG4D-211ENST00000589753 SLC5A6Q9Y289 635 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms