RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
NEDD4L-223ENST00000588516 FBXL4Q9UKA2 621 aa12.79□□□□□ -0.36
NEDD4L-223ENST00000588516 AK6Q9Y3D8 172 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-223ENST00000588516 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
NEDD4L-223ENST00000588516 ATG2BQ96BY7 2078 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 TMEM131Q92545 1883 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 TRAV6A0A075B6T7 132 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 A0A1W2PQD3 144 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 C17orf105B2RV13 164 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 B4DGG1 531 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 BLOC1S5-TXNDC5H3BN57 136 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 DVL2O14641 736 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 FABP7O15540 132 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 CDC40O60508 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 KHDRBS3O75525 346 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 CD3GP09693 182 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 SULT1A3P0DMM9 295 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 SULT1A4P0DMN0 295 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 CEACAM1P13688 526 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 PRKCAP17252 672 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 HOXA6P31267 233 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 CAPZA1P52907 286 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 DGCR2P98153 550 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 SSBP1Q04837 148 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 TOMM20Q15388 145 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 GSG1Q2KHT4 349 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 ZNF684Q5T5D7 378 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 FNDC7Q5VTL7 733 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 YOD1Q5VVQ6 348 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 OLFML2AQ68BL7 652 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 GLCCI1Q86VQ1 547 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 ZNF227Q86WZ6 799 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 CMTM4Q8IZR5 234 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 ZNF563Q8TA94 476 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 C1orf216Q8TAB5 229 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 ASB13Q8WXK3 278 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 SNAPC3Q92966 411 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 MIB2Q96AX9 1013 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 DACT3Q96B18 629 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 TOE1Q96GM8 510 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 LCORQ96JN0 433 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 WDR76Q9H967 626 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 MMP25Q9NPA2 562 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
NEDD4L-223ENST00000588516 TRBV5-5A0A0J9YX44 114 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 A0A1B0GUH1 482 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 TUBAL3A6NHL2 446 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 TTLL8A6PVC2 850 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 XKRYO14609 159 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 SELENOFO60613 162 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 UTS2O95399 124 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 IL5P05113 134 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 TPOP07202 933 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 PGCP20142 388 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 CXCR1P25024 350 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 UQCRC1P31930 480 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 EVI2BP34910 448 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 GALK2Q01415 458 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 SKP2Q13309 424 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 DEFB110Q30KQ9 67 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 NDUFAF6Q330K2 333 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 LINC01590Q5TEZ4 76 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 FDX2Q6P4F2 183 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 MAMDC2Q7Z304 686 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 CDC20BQ86Y33 519 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 ARL14Q8N4G2 192 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 OR4C3Q8NH37 302 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 GPR148Q8TDV2 347 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 HAVCR1Q96D42 359 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 TCEAL2Q9H3H9 227 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 TAS2R10Q9NYW0 307 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 MGAT4AQ9UM21 535 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 ADAM18Q9Y3Q7 739 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 SCN2AQ99250 2005 aa12.77□□□□□ -0.37
NEDD4L-223ENST00000588516 GCN1Q92616 2671 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 TRAV36DV7A0A075B6V5 113 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 OR6C76A6NM76 312 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 ANXA2P2A6NMY6 339 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 SNRPGP15A8MWD9 76 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 GNB5O14775 395 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 ADAM11O75078 769 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 SLC25A12O75746 678 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 ANXA2P07355 339 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 GP1BBP13224 206 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 DPP4P27487 766 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 CFPP27918 469 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 IL12BP29460 328 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 AQP2P41181 271 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 PPM1FP49593 454 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 RAB14P61106 215 aa12.76□□□□□ -0.37
NEDD4L-223ENST00000588516 FAM122BQ7Z309 247 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms