RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 IFNGP01579 166 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 HRGP04196 525 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 FBXO45P0C2W1 286 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 IFI30P13284 250 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 PGCP20142 388 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 PAICSP22234 425 aaKnown RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 TCEA1P23193 301 aaKnown RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 GSTT1P30711 240 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SLC6A6P31641 620 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 EVI2BP34910 448 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ACAA2P42765 397 aaKnown RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 GPR4P46093 362 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CAPZA2P47755 286 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 MAP2K6P52564 334 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 PRPS1P60891 318 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 RELBQ01201 579 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SRYQ05066 204 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 RAB40BQ12829 278 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SKP2Q13309 424 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 GINS1Q14691 196 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 DAZAP2Q15038 168 aaPredicted RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 TOMM20Q15388 145 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SNAPC1Q16533 368 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 PGGHGQ32M88 737 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CNPY1Q3B7I2 92 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ELOA3BQ3SY89 546 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 TIMM50Q3ZCQ8 353 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 Q5PR19 223 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SYT6Q5T7P8 510 aaPredicted RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 XAF1Q6GPH4 301 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 LAIR2Q6ISS4 152 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SMARCD3Q6STE5 483 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ZNF367Q7RTV3 350 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 YRDCQ86U90 279 aaKnown RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 CLVS1Q8IUQ0 354 aaPredicted RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 NKAIN4Q8IVV8 208 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 GCNT2Q8N0V5 402 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CADM2Q8N3J6 435 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ELOA3Q8NG57 546 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 OR4C3Q8NH37 302 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ZNF563Q8TA94 476 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 TMEM163Q8TC26 289 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 TMEM234Q8WY98 164 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 Q96MF0 132 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SIGLEC11Q96RL6 698 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ADOQ96SZ5 270 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 DOK1Q99704 481 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 PRSS27Q9BQR3 290 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 TSSK6Q9BXA6 273 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CDCA4Q9BXL8 241 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ACKR4Q9NPB9 350 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 SDHAF3Q9NRP4 125 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CHCHD3Q9NX63 227 aaKnown RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 ZNF226Q9NYT6 803 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CNIH4Q9P003 139 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 WARS2Q9UGM6 360 aaKnown RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 BOKQ9UMX3 212 aaPredicted RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 CEPT1Q9Y6K0 416 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CSPG4Q6UVK1 2322 aa7□□□□□ -1.29
VMP1-204ENST00000587259 PCNX3Q9H6A9 2034 aa7□□□□□ -1.29
VMP1-204ENST00000587259 RIIAD1A6NNX1 92 aa7□□□□□ -1.29
VMP1-204ENST00000587259 C17orf51A8MQB3 221 aa7□□□□□ -1.29
VMP1-204ENST00000587259 INAFM1C9JVW0 142 aa7□□□□□ -1.29
VMP1-204ENST00000587259 IDH3BO43837 385 aa7□□□□□ -1.29
VMP1-204ENST00000587259 ICOSLGO75144 302 aa7□□□□□ -1.29
VMP1-204ENST00000587259 NDUFB2O95178 105 aa7□□□□□ -1.29
VMP1-204ENST00000587259 LYPD3O95274 346 aa7□□□□□ -1.29
VMP1-204ENST00000587259 IL2RAP01589 272 aa7□□□□□ -1.29
VMP1-204ENST00000587259 TP53P04637 393 aaPredicted RBP7□□□□□ -1.29
VMP1-204ENST00000587259 HEXAP06865 529 aa7□□□□□ -1.29
VMP1-204ENST00000587259 HTR1AP08908 422 aa7□□□□□ -1.29
VMP1-204ENST00000587259 DBTP11182 482 aaKnown RBP7□□□□□ -1.29
VMP1-204ENST00000587259 PRG2P13727 222 aa7□□□□□ -1.29
VMP1-204ENST00000587259 ZNF3P17036 446 aa7□□□□□ -1.29
VMP1-204ENST00000587259 MYL12AP19105 171 aa7□□□□□ -1.29
VMP1-204ENST00000587259 PCMT1P22061 227 aa7□□□□□ -1.29
VMP1-204ENST00000587259 SLC1A3P43003 542 aa7□□□□□ -1.29
VMP1-204ENST00000587259 P2RX1P51575 399 aa7□□□□□ -1.29
VMP1-204ENST00000587259 CCR4P51679 360 aa7□□□□□ -1.29
VMP1-204ENST00000587259 EMX1Q04741 257 aaPredicted RBP7□□□□□ -1.29
VMP1-204ENST00000587259 C17orf67Q0P5P2 114 aa7□□□□□ -1.29
VMP1-204ENST00000587259 PMS2P3Q13401 168 aa7□□□□□ -1.29
VMP1-204ENST00000587259 FBXL19-AS1Q494R0 122 aa7□□□□□ -1.29
VMP1-204ENST00000587259 UBE2UQ5VVX9 321 aa7□□□□□ -1.29
VMP1-204ENST00000587259 FOXB2Q5VYV0 432 aa7□□□□□ -1.29
VMP1-204ENST00000587259 NXNL2Q5VZ03 156 aa7□□□□□ -1.29
VMP1-204ENST00000587259 NSUN5P2Q63ZY6 315 aa7□□□□□ -1.29
VMP1-204ENST00000587259 GTF2IRD2BQ6EKJ0 949 aa7□□□□□ -1.29
VMP1-204ENST00000587259 LINC00114Q6XXX2 140 aa7□□□□□ -1.29
VMP1-204ENST00000587259 ZAR1Q86SH2 424 aa7□□□□□ -1.29
VMP1-204ENST00000587259 OAFQ86UD1 273 aa7□□□□□ -1.29
VMP1-204ENST00000587259 GTF2IRD2Q86UP8 949 aa7□□□□□ -1.29
VMP1-204ENST00000587259 ERI1Q8IV48 349 aaKnown RBP7□□□□□ -1.29
VMP1-204ENST00000587259 CCDC103Q8IW40 242 aa7□□□□□ -1.29
VMP1-204ENST00000587259 LNX2Q8N448 690 aa7□□□□□ -1.29
VMP1-204ENST00000587259 TCEANCQ8N8B7 351 aa7□□□□□ -1.29
VMP1-204ENST00000587259 OR5W2Q8NH69 310 aa7□□□□□ -1.29
VMP1-204ENST00000587259 ST8SIA1Q92185 356 aa7□□□□□ -1.29
VMP1-204ENST00000587259 ISOC1Q96CN7 298 aa7□□□□□ -1.29
VMP1-204ENST00000587259 SGTBQ96EQ0 304 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms