RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 PNPP00491 289 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
NPC1-205ENST00000587163 EPHA1P21709 976 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 MAGEB1P43366 347 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 ARFIP2P53365 341 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 MRPS11P82912 194 aaKnown RBP13.97□□□□□ -0.17
NPC1-205ENST00000587163 MYBPC1Q00872 1141 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 CAMK2DQ13557 499 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 RAB39AQ14964 217 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 REP15Q6BDI9 236 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 ZNF584Q8IVC4 421 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 KIRREL3Q8IZU9 778 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 LSMEM1Q8N8F7 131 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 ADPRHL1Q8NDY3 354 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 FGFBP3Q8TAT2 258 aa13.97□□□□□ -0.17
NPC1-205ENST00000587163 CACYBPQ9HB71 228 aaKnown RBP13.97□□□□□ -0.17
NPC1-205ENST00000587163 SSU72Q9NP77 194 aaKnown RBP13.97□□□□□ -0.17
NPC1-205ENST00000587163 TMEM247A6NEH6 219 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 LRRN3E7EW58 273 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 TRIM77I1YAP6 450 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 TPST1O60507 370 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 CLPTM1O96005 669 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 BGLAPP02818 100 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 GALK2Q01415 458 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 SCGB2A2Q13296 93 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 RGNQ15493 299 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 KRT71Q3SY84 523 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 PDCD4Q53EL6 469 aaKnown RBP13.96□□□□□ -0.17
NPC1-205ENST00000587163 ALG10BQ5I7T1 473 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 C5orf46Q6UWT4 87 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 SKA3Q8IX90 412 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 OR6N1Q8NGY5 312 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 ZBTB9Q96C00 473 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 ITCHQ96J02 903 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 MOGAT1Q96PD6 335 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 FOXB1Q99853 325 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 RBM4Q9BWF3 364 aaKnown RBP13.96□□□□□ -0.17
NPC1-205ENST00000587163 ZNF416Q9BWM5 594 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 ULBP2Q9BZM5 246 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 A4GALTQ9NPC4 353 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 B3GAT2Q9NPZ5 323 aa13.96□□□□□ -0.17
NPC1-205ENST00000587163 THUMPD1Q9NXG2 353 aaKnown RBP13.96□□□□□ -0.17
NPC1-205ENST00000587163 A0A1W2PPW3 197 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 HDAC3O15379 428 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 RGS16O15492 202 aaPredicted RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 PLPP2O43688 288 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 CDC14BO60729 498 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 RAB36O95755 333 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 KITP10721 976 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 RPS23P62266 143 aaKnown RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 CCL8P80075 99 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 AVPI1Q5T686 147 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 ACSM5Q6NUN0 579 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 PAQR4Q8N4S7 273 aaPredicted RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 OR9I1Q8NGQ6 314 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 BBS10Q8TAM1 723 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 MGARPQ8TDB4 240 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 DNAJA4Q8WW22 397 aaPredicted RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 TSPAN32Q96QS1 320 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 PAIP2Q9BPZ3 127 aaKnown RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 TMPRSS13Q9BYE2 586 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 PAIP1Q9H074 479 aaKnown RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
NPC1-205ENST00000587163 ZNF385DQ9H6B1 395 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 ZNF665Q9H7R5 613 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 ESM1Q9NQ30 184 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 TAAR3PQ9P1P4 343 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 CORINQ9Y5Q5 1042 aa13.95□□□□□ -0.18
NPC1-205ENST00000587163 ZNF726A6NNF4 738 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 CLIC1O00299 241 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 ZNF500O60304 480 aaPredicted RBP13.94□□□□□ -0.18
NPC1-205ENST00000587163 DEAF1O75398 565 aaPredicted RBP13.94□□□□□ -0.18
NPC1-205ENST00000587163 MPZL1O95297 269 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 SERPINA5P05154 406 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 BMP2P12643 396 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 IDO1P14902 403 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 ADRA2CP18825 462 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 PRKAR1BP31321 381 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 MVKQ03426 396 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 PUDPQ08623 228 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 PMS2P3Q13401 168 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 AWAT1Q58HT5 328 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 C6orf10Q5SRN2 563 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 NXNQ6DKJ4 435 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 ULK3Q6PHR2 472 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 WDR88Q6ZMY6 472 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 MIER2Q8N344 545 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 SCAIQ8N9R8 606 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 OR6S1Q8NH40 331 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 GTF2H4Q92759 462 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 SLC6A7Q99884 636 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 WFDC6Q9BQY6 131 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 ASPNQ9BXN1 380 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 RMND5AQ9H871 391 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 KCNK9Q9NPC2 374 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 SLC7A8Q9UHI5 535 aa13.94□□□□□ -0.18
NPC1-205ENST00000587163 TRPC5OSA6NMA1 111 aa13.93□□□□□ -0.18
NPC1-205ENST00000587163 C17orf100A8MU93 164 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms