RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 AGAP20933 346 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 NOS3P29474 1203 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ACVR1BP36896 505 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 OR3A2P47893 321 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 SELENOPP49908 381 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 RAD23AP54725 363 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 RAP1BP61224 184 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ESRRGP62508 458 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 RAP1AP62834 184 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 CAMK2DQ13557 499 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 LRRC36Q1X8D7 754 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 SLC25A35Q3KQZ1 300 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 SLC36A3Q495N2 470 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 CLEC12AQ5QGZ9 265 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 CARD17Q5XLA6 110 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 LPCAT4Q643R3 524 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 GPR139Q6DWJ6 353 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 XKRXQ6PP77 449 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 TFAP2EQ6VUC0 442 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 NHLRC1Q6VVB1 395 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.07□□□□□ -0.48
VMP1-203ENST00000586245 MRGPRGQ86SM5 289 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 LIX1LQ8IVB5 337 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 UBE2J2Q8N2K1 259 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ZNF808Q8N4W9 903 aaPredicted RBP12.07□□□□□ -0.48
VMP1-203ENST00000586245 OR2T33Q8NG76 320 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 CA5BP1Q8WTZ4 195 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ASB10Q8WXI3 467 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ZNF566Q969W8 418 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ERMAPQ96PL5 475 aaPredicted RBP12.07□□□□□ -0.48
VMP1-203ENST00000586245 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 OR2M2Q96R28 347 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 PLA2G12AQ9BZM1 189 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ENKD1Q9H0I2 346 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 C8orf4Q9NR00 106 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 BAIAP2Q9UQB8 552 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 IER3IP1Q9Y5U9 82 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 MED12LQ86YW9 2145 aa12.07□□□□□ -0.48
VMP1-203ENST00000586245 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 XKRYO14609 159 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 IMPA2O14732 288 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 MSTNO14793 375 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 CASQ2O14958 399 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 ARPC3O15145 178 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 IDH3BO43837 385 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 MITFO75030 526 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 CGAP01215 116 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 IGHG1P01857 330 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 TP53P04637 393 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 ALPLP05186 524 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 IGFBP1P08833 259 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 PEX2P28328 305 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 SDHAP31040 664 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 NTF4P34130 210 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 CRISP1P54107 249 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 CLRN1P58418 232 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 ARMC4Q5T2S8 1044 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 BEND4Q6ZU67 534 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 LUZP2Q86TE4 346 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 GPR137CQ8N3F9 429 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 ARIH2OSQ8N7S6 290 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 ZNF610Q8N9Z0 462 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 POMGNT2Q8NAT1 580 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 OR8D4Q8NGM9 314 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 OR6N1Q8NGY5 312 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 LILRB4Q8NHJ6 448 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 SLC25A44Q96H78 314 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 Q96M85 177 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 TEX12Q9BXU0 123 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 OPN3Q9H1Y3 402 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 SLCO5A1Q9H2Y9 848 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 VCXQ9H320 206 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 B3GAT2Q9NPZ5 323 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 TMEFF2Q9UIK5 374 aaPredicted RBP12.06□□□□□ -0.48
VMP1-203ENST00000586245 RELNP78509 3460 aa12.06□□□□□ -0.48
VMP1-203ENST00000586245 TEX13CA0A0J9YWL9 993 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 BHLHE40O14503 412 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
VMP1-203ENST00000586245 ZNF432O94892 652 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 CNOT4O95628 575 aaKnown RBP12.05□□□□□ -0.48
VMP1-203ENST00000586245 TXNDC12O95881 172 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 IGHV3-9P01782 118 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 NR2C1P13056 603 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 ACADSP16219 412 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 CSNK1A1P48729 337 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 KRR1Q13601 381 aaKnown RBP12.05□□□□□ -0.48
VMP1-203ENST00000586245 GINS1Q14691 196 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 PGGHGQ32M88 737 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 OGFRL1Q5TC84 451 aaPredicted RBP12.05□□□□□ -0.48
VMP1-203ENST00000586245 TSPO2Q5TGU0 170 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 SLC27A4Q6P1M0 643 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 FAM122BQ7Z309 247 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 JAZF1Q86VZ6 243 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 FAM26EQ8N5C1 309 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 PACRGLQ8N7B6 248 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms