RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CXXC5Q7LFL8 322 aaKnown RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 GHDCQ8N2G8 530 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 STX19Q8N4C7 294 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 IQCF1Q8N6M8 205 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 LRRC75AQ8NAA5 344 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ADAD1Q96M93 576 aaKnown RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 KLHL15Q96M94 604 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ZNF582Q96NG8 517 aaPredicted RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 MOGAT1Q96PD6 335 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 ERMAPQ96PL5 475 aaPredicted RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 SIGLEC11Q96RL6 698 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 MNTQ99583 582 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 TIMP4Q99727 224 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 TXNIPQ9H3M7 391 aa11.31□□□□□ -0.6
VMP1-202ENST00000585847 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 PLEKHB1Q9UF11 243 aaPredicted RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 DIMT1Q9UNQ2 313 aaKnown RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 EXOSC1Q9Y3B2 195 aaKnown RBP11.31□□□□□ -0.6
VMP1-202ENST00000585847 ARHGAP21Q5T5U3 1957 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 H0YC42 278 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 BLOC1S5-TXNDC5H3BN57 136 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 PLPP3O14495 311 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 ENTPD6O75354 484 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 ACTL6AO96019 429 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 DBTP11182 482 aaKnown RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 MYL12AP19105 171 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 ALDH3B2P48448 385 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 SUCLG1P53597 346 aaKnown RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 CLDN18P56856 261 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 MYBPHQ13203 477 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 MRPL49Q13405 166 aaKnown RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 C1DQ13901 141 aaKnown RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 GGTLC2Q14390 218 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 C3AR1Q16581 482 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 NIPAL3Q6P499 406 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 GFRALQ6UXV0 394 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 THSD4Q6ZMP0 1018 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 Q6ZPB1 254 aaPredicted RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 FAM122BQ7Z309 247 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 GGNQ86UU5 652 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 ARIH2OSQ8N7S6 290 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 OR2T4Q8NH00 348 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 WDYHV1Q96HA8 205 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 TMEM80Q96HE8 168 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 ADGRG7Q96K78 797 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 KATNB1Q9BVA0 655 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 SF3B5Q9BWJ5 86 aaKnown RBP11.3□□□□□ -0.6
VMP1-202ENST00000585847 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 ERGIC3Q9Y282 383 aa11.3□□□□□ -0.6
VMP1-202ENST00000585847 AQP7P3A6NL99 342 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 MCIDASD6RGH6 385 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 NPIPA2E9PIF3 369 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 NPIPA3F8WFD2 350 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 M0R082 166 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 SULT2B1O00204 365 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 RNF13O43567 381 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 PPP1R3DO95685 299 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 RAB36O95755 333 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 RENP00797 406 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 TFAP2AP05549 437 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 ADORA3P0DMS8 318 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 ZNF708P17019 499 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 FMO3P31513 532 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 AQP2P41181 271 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 AGFG1P52594 562 aaKnown RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 CLDN20P56880 219 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 CTXN1P60606 82 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 RAC3P60763 192 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 RPL27P61353 136 aaKnown RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 ITGADQ13349 1161 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 PON3Q15166 354 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 POMZP3Q6PJE2 187 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 AHSA2Q719I0 299 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 MEPCEQ7L2J0 689 aaKnown RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 ZNF367Q7RTV3 350 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 SPARTQ8N0X7 666 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 ZNF420Q8TAQ5 688 aaPredicted RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 ZNF417Q8TAU3 575 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 RORBQ92753 470 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 ABTB1Q969K4 478 aaPredicted RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 CPNE4Q96A23 557 aaPredicted RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 ZNF587Q96SQ5 575 aaPredicted RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 MND1Q9BWT6 205 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 SPTBN1Q01082 2364 aaKnown RBP11.29□□□□□ -0.6
VMP1-202ENST00000585847 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 POLEQ07864 2286 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 ESPL1Q14674 2120 aa11.29□□□□□ -0.6
VMP1-202ENST00000585847 PHF3Q92576 2039 aaKnown RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
VMP1-202ENST00000585847 OR14I1A6ND48 311 aa11.28□□□□□ -0.6
VMP1-202ENST00000585847 PTGES3LE9PB15 166 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms