RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 MMADHCQ9H3L0 296 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 DENND2DQ9H6A0 471 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 PLEKHF2Q9H8W4 249 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 POMPQ9Y244 141 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 SLC25A15Q9Y619 301 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 AQP12BA6NM10 295 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 EFCAB9A8MZ26 197 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 MCIDASD6RGH6 385 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 C11orf98E9PRG8 122 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 PIP5K1CO60331 668 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 GADD45GO95257 159 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 HPRP00739 348 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 IGHMP01871 453 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 RAF1P04049 648 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 CD3EP07766 207 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 DNASE1P24855 282 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 LOXP28300 417 aaPredicted RBP12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 MAGEA2P43356 314 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 CSNK1A1P48729 337 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 RPL18Q07020 188 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 FLOT2Q14254 428 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 FAM98BQ52LJ0 330 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 ALG10Q5BKT4 473 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 ASRGL1Q7L266 308 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 AQP12AQ8IXF9 295 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 SLC7A13Q8TCU3 470 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 PIGTQ969N2 578 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 PLPPR2Q96GM1 343 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 ULBP2Q9BZM5 246 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 SMURF2Q9HAU4 748 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 ST6GALNAC2Q9UJ37 374 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 FBXL3Q9UKT7 428 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 ABCA4P78363 2273 aa12.13□□□□□ -0.47
PRKCSH-202ENST00000585540 BLOC1S5-TXNDC5H3BN57 136 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 CLOCKO15516 846 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 UPK3AO75631 287 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 IFNGR1P15260 489 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 ERFP50548 548 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 TBRG1Q3YBR2 411 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 FGD3Q5JSP0 725 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 SEZ6L2Q6UXD5 910 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 ZNF704Q6ZNC4 412 aaPredicted RBP12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 OAFQ86UD1 273 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 ZDHHC21Q8IVQ6 265 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 DEPDC4Q8N2C3 294 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 NOXO1Q8NFA2 376 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 TMEM54Q969K7 222 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 UTP4Q969X6 686 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 TXNIPQ9H3M7 391 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 YY1AP1Q9H869 796 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 CRLF2Q9HC73 371 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 GPR35Q9HC97 309 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 C20orf141Q9NUB4 165 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 MED29Q9NX70 200 aa12.12□□□□□ -0.47
PRKCSH-202ENST00000585540 UTP20O75691 2785 aaKnown RBP12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 A6NIZ1 184 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 SIAH2O43255 324 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 AHCYL1O43865 530 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 BIDP55957 195 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 RAP1BP61224 184 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 RAP1AP62834 184 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 SPIBQ01892 262 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ACKR1Q16570 336 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 CEACAM16Q2WEN9 425 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 SPATA24Q86W54 205 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ZNF611Q8N823 705 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ASB10Q8WXI3 467 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ALPK1Q96QP1 1244 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 GPX7Q96SL4 187 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 FOXC2Q99958 501 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 GLTPQ9NZD2 209 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 CRNNQ9UBG3 495 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 TMCC3Q9ULS5 477 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 AURKCQ9UQB9 309 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
PRKCSH-202ENST00000585540 ABCA12Q86UK0 2595 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 HS3ST1O14792 307 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 NDUFB2O95178 105 aa12.1□□□□□ -0.47
PRKCSH-202ENST00000585540 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms