RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TVP23BQ9NYZ1 205 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 H2AFY2Q9P0M6 372 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 FAM215AQ9Y5M1 114 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 KIAA1549Q9HCM3 1950 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CCDC168Q8NDH2 2452 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 DOCK7Q96N67 2140 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM72A0PK05 275 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 H0YC42 278 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 SULT2B1O00204 365 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 KLF4O43474 513 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 CXCL13O43927 109 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 AHSA1O95433 338 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 PMS2P2O95744 297 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 IFNGP01579 166 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 OPN1LWP04000 364 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 CDK1P06493 297 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 GABRB1P18505 474 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 PAICSP22234 425 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 SHC1P29353 583 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 SLC6A6P31641 620 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 IDUAP35475 653 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 GPR4P46093 362 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TMBIM6P55061 237 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 RAC3P60763 192 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 MYBPHQ13203 477 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 C1DQ13901 141 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 RAB39AQ14964 217 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 PGGHGQ32M88 737 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 RIPPLY2Q5TAB7 128 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 RTL6Q6ICC9 239 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 OR2A2Q6IF42 318 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TMPPEQ6ZT21 453 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 CCDC71Q8IV32 467 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 GID4Q8IVV7 300 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM163Q8TC26 289 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 RAB2BQ8WUD1 216 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 APH1BQ8WW43 257 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 RND1Q92730 232 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 MUL1Q969V5 352 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 SGTBQ96EQ0 304 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 POM121Q96HA1 1249 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 PRSS27Q9BQR3 290 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TTYH2Q9BSA4 534 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM43Q9BTV4 400 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 PRRG4Q9BZD6 226 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 OR11A1Q9GZK7 315 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 YIPF3Q9GZM5 350 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 FN3KQ9H479 309 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 CXorf56Q9H5V9 222 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 TRAPPC4Q9Y296 219 aa12.05□□□□□ -0.48
CSNK1D-220ENST00000581737 A0A087WUJ7 227 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 MBD3L4A6NDZ8 208 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 MBD3L3A6NE82 208 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 MBD3L5A6NJ08 208 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 HSPB2A8KAH6 182 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 PRODHO43272 600 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 EIF1BO60739 113 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 SEC14L2O76054 403 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 IL2RAP01589 272 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 MT-ND2P03891 347 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 GLI4P10075 376 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 TIMP3P35625 211 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 DIO1P49895 249 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 SLC35A1P78382 337 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 ADORA2A-AS1P86434 159 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 TMED1Q13445 227 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 PON3Q15166 354 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 HSPB2Q16082 182 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 CNPY1Q3B7I2 92 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 EEF1A1P5Q5VTE0 462 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 C1orf140Q5VVS0 124 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 GTF2IRD2BQ6EKJ0 949 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 SMARCD3Q6STE5 483 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF367Q7RTV3 350 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 GTF2IRD2Q86UP8 949 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 TCEANCQ8N8B7 351 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 OR13F1Q8NGS4 319 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 MBD3L2Q8NHZ7 208 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF426Q9BUY5 554 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 TAPBPLQ9BX59 468 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 RBM38Q9H0Z9 239 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 OR52D1Q9H346 318 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 FKBP14Q9NWM8 211 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 COQ3Q9NZJ6 369 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 ERVK-18Q9QC07 812 aa12.04□□□□□ -0.48
CSNK1D-220ENST00000581737 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 TRAV36DV7A0A075B6V5 113 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 RIIAD1A6NNX1 92 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 OR2T1O43869 369 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 PIP5K1CO60331 668 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 NPIPB7O75200 414 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 FADS2O95864 444 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms