RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MSH6P52701 1360 aa3.08□□□□□ -1.92
SMCHD1-205ENST00000581383 A0A0U1RQS6 177 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 XKRY2A2RUG3 117 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 FAM47DPA6NHR8 397 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 FAM166BA8MTA8 275 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 MGRN1O60291 552 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 NDUFB10O96000 172 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 SERPIND1P05546 499 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 MCF2P10911 925 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 PSG2P11465 335 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 TDGF1P13385 188 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC26A3P40879 764 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 CRYBB2P43320 205 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 YAP1P46937 504 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 CSNK1DP48730 415 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 TDGF1P3P51864 188 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 PLP1P60201 277 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 KCNJ2P63252 427 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 IRX3P78415 501 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 ENPEPQ07075 957 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 EIF4EBP2Q13542 120 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 FZD2Q14332 565 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 PSG5Q15238 335 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 TGFBIQ15582 683 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 RFX4Q33E94 735 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 CCDC183Q5T5S1 534 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 CYB5R2Q6BCY4 276 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF429Q86V71 674 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 FAM228AQ86W67 206 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF433Q8N7K0 673 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 ARIH2OSQ8N7S6 290 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 ZNF557Q8N988 423 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 VN1R2Q8NFZ6 395 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 NPBQ8NG41 125 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 OR10G9Q8NGN4 311 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 OR1N2Q8NGR9 330 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 OR6X1Q8NH79 312 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 DTX3LQ8TDB6 740 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 BLOC1S5Q8TDH9 187 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 STMN2Q93045 179 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 RNF185Q96GF1 192 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 HDHD3Q9BSH5 251 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC2A8Q9NY64 477 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 XCL2Q9UBD3 114 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 CTNNA3Q9UI47 895 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 ARHGAP21Q5T5U3 1957 aa3.07□□□□□ -1.92
SMCHD1-205ENST00000581383 TRBV6-6A0A0A6YYG2 114 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 TRIM64CA6NLI5 447 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 GOSR2O14653 212 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC31A2O15432 143 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CA11O75493 328 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 UPK3AO75631 287 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CST1P01037 141 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CT62P0C5K7 136 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 GKN3PP0CG01 181 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 TOP1P11387 765 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CNR1P21554 472 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CHMLP26374 656 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 IFNA8P32881 189 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 GPR6P46095 362 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 SUB1P53999 127 aaKnown RBP eCLIP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 FBXW4P57775 412 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 RNASEKQ6P5S7 137 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 ASCL5Q7RTU5 278 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CDR2LQ86X02 465 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 OR2G3Q8NGZ4 309 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 KCNG3Q8TAE7 436 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC22A8Q8TCC7 542 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC2A14Q8TDB8 520 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 MCOLN3Q8TDD5 553 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 IL22RA2Q969J5 263 aa3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 PACSIN2Q9UNF0 486 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 CSDC2Q9Y534 153 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-205ENST00000581383 IGKV1D-13A0A0B4J2D9 117 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 ERVV-1B6SEH8 477 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 CIB2O75838 187 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC25A27O95847 323 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 PCCAP05165 728 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 C2P06681 752 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 CSF3P09919 207 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 IGKV1-13P0DP09 117 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 TNNI1P19237 187 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 NMUP48645 174 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 CCR6P51684 374 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 LRRC74AQ0VAA2 488 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 AQP6Q13520 282 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 ARHGAP19Q14CB8 494 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 ZYG11AQ6WRX3 759 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 SLC25A48Q6ZT89 311 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 LHFPL3Q86UP9 236 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 MDS2Q8NDY4 140 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 OR51G1Q8NGK1 321 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 RNF139Q8WU17 664 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 SDR42E1Q8WUS8 393 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 SGK3Q96BR1 496 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 CNDP1Q96KN2 507 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 SH3GL1Q99961 368 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 SLCO1B3Q9NPD5 702 aa3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 PSMC3IPQ9P2W1 217 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-205ENST00000581383 PCYOX1Q9UHG3 505 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms