RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 NANOGQ9H9S0 305 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 TMEM165Q9HC07 324 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 IL20RAQ9UHF4 553 aa11.68□□□□□ -0.54
CSNK1D-213ENST00000580446 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 CCDC189A1A4V9 331 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 SLC22A23A1A5C7 686 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 MT-ND5P03915 603 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 RBP1P09455 135 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 CD33P20138 364 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 PDE7AQ13946 482 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 KLHL22Q53GT1 634 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 TTMPQ5BVD1 217 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 RNF130Q86XS8 419 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 DDIASQ8IXT1 998 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 CCDC36Q8IYA8 594 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 SLC30A7Q8NEW0 376 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF519Q8TB69 540 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 IPCEF1Q8WWN9 437 aaPredicted RBP11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 SLC25A36Q96CQ1 311 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 PBKQ96KB5 322 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 TAPBPLQ9BX59 468 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 PPA2Q9H2U2 334 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 MSL2Q9HCI7 577 aa11.67□□□□□ -0.54
CSNK1D-213ENST00000580446 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 SEC22BO75396 215 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 WNT2P09544 360 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 CD28P10747 220 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 RPS2P15880 293 aaKnown RBP11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 FKBP2P26885 142 aaKnown RBP11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 SERPINB8P50452 374 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 MMP15P51511 669 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 DR1Q01658 176 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 ARHGAP11BQ3KRB8 267 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 RUNDC3AQ59EK9 446 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 FAM209AQ5JX71 171 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 ZFAND6Q6FIF0 208 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 ADAMTSL5Q6ZMM2 481 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 RNF144BQ7Z419 303 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 TMEM123Q8N131 208 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 FITM2Q8N6M3 262 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 ASCL2Q99929 193 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 EGLN1Q9GZT9 426 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 PIF1Q9H611 641 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 ACOXLQ9NUZ1 547 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 EXD2Q9NVH0 621 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 TMCO1Q9UM00 188 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 LRCH1Q9Y2L9 728 aa11.66□□□□□ -0.54
CSNK1D-213ENST00000580446 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 SERTM1A2A2V5 107 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 STX11O75558 287 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 C6orf47O95873 294 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 SERPINA5P05154 406 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 PNMTP11086 282 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 SDC1P18827 310 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 SOAT1P35610 550 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 HTR3AP46098 478 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 PMS2P3Q13401 168 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 CAMK2DQ13557 499 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 ZNF678Q5SXM1 525 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 THEM4Q5T1C6 240 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 KLBQ86Z14 1044 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 LRRC8AQ8IWT6 810 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 SKA3Q8IX90 412 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 ANKK1Q8NFD2 765 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 OR56A1Q8NGH5 318 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 OR1J1Q8NGS3 322 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 SIGLEC11Q96RL6 698 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 ARHGDIGQ99819 225 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 C1QTNF3Q9BXJ4 246 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 B3GAT1Q9P2W7 334 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 POFUT2Q9Y2G5 429 aa11.65□□□□□ -0.54
CSNK1D-213ENST00000580446 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 C22orf46C9J442 243 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 IGHV3-13P01766 116 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF43P17038 809 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 CXCR1P25024 350 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 EFNB2P52799 333 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 TNFAIP6P98066 277 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 PRB3Q04118 309 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 C1DQ13901 141 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 FAM153CQ494X1 144 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 TYW3Q6IPR3 259 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 C16orf62Q7Z3J2 963 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 MIER2Q8N344 545 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 SPC24Q8NBT2 197 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 SCCPDHQ8NBX0 429 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 PIK3C3Q8NEB9 887 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 DCAKDQ8WVC6 231 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 GATAD2BQ8WXI9 593 aa11.64□□□□□ -0.55
CSNK1D-213ENST00000580446 LHX4Q969G2 390 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms