RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 OR10D3Q8NH80 312 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 ADAD1Q96M93 576 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 ENKD1Q9H0I2 346 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 TNFRSF10DQ9UBN6 386 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 ZNF346Q9UL40 294 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 SNX5Q9Y5X3 404 aa12.45□□□□□ -0.42
CSNK1D-209ENST00000578904 A0A087WXM4 84 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC22A31A6NKX4 558 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ZNF726A6NNF4 738 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 CENPBD1B2RD01 187 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ZNHIT1O43257 154 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 CXCL13O43927 109 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 WBP4O75554 376 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 SERPINI2O75830 405 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 HIST1H1CP16403 213 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ABOP16442 354 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 CRHBPP24387 322 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 FMO3P31513 532 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 PTGS2P35354 604 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ACVR1BP36896 505 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 BLVRAP53004 296 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 CDH11P55287 796 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 CLDN18P56856 261 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 EFNB1P98172 346 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 POU3F1Q03052 451 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 SRYQ05066 204 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ITGADQ13349 1161 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ACKR1Q16570 336 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 DNM1P34Q6PK57 102 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 FGD2Q7Z6J4 655 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 CPOQ8IVL8 374 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 OR4K13Q8NH42 304 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 UBE2FQ969M7 185 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 RELTQ969Z4 430 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 Q96M85 177 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 MYCBPQ99417 103 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 WARS2Q9UGM6 360 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 PCDHGB1Q9Y5G3 927 aa12.44□□□□□ -0.42
CSNK1D-209ENST00000578904 SVILO95425 2214 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 SHANK1Q9Y566 2161 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 CLCA1A8K7I4 914 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 KDM4EB2RXH2 506 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 GPR171O14626 319 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 ARHGEF9O43307 516 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 ENTPD6O75354 484 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 TPOP07202 933 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 FCGR2AP12318 317 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 IFNGR1P15260 489 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 CRABP1P29762 137 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 ATP6V1E1P36543 226 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC25A1P53007 311 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 RPS7P62081 194 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 POU4F2Q12837 409 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 PON3Q15166 354 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 RNPS1Q15287 305 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 C3AR1Q16581 482 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC35D3Q5M8T2 416 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 PLBD1Q6P4A8 553 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 LEG1Q6P5S2 330 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 MEPCEQ7L2J0 689 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 CCDC103Q8IW40 242 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 MCEMP1Q8IX19 187 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 STX19Q8N4C7 294 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC37A3Q8NCC5 494 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 TSPAN14Q8NG11 270 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 APH1BQ8WW43 257 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 ZNF582Q96NG8 517 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 TSPAN32Q96QS1 320 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 RBP7Q96R05 134 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 TIMP4Q99727 224 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 MRPS26Q9BYN8 205 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 DNAJC27Q9NZQ0 273 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 EMC3Q9P0I2 261 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 KLHL9Q9P2J3 617 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 MOKQ9UQ07 419 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 CAMK2AQ9UQM7 478 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 GPR52Q9Y2T5 361 aa12.43□□□□□ -0.42
CSNK1D-209ENST00000578904 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 RGS10O43665 173 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC19A2O60779 497 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 SMNDC1O75940 238 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 PLGP00747 810 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 IGHG1P01857 330 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 PIPP12273 146 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 HTR1FP30939 366 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 MTNR1AP48039 350 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 SUCLG1P53597 346 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 SLC16A1P53985 500 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 TUBA4AP68366 448 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 RAB40BQ12829 278 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 CRMP1Q14194 572 aa12.42□□□□□ -0.42
CSNK1D-209ENST00000578904 KLHL12Q53G59 568 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms