RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 A0A096LPI6 279 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 IGHV1-69-2A0A0G2JMI3 117 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TLDC2A0PJX2 215 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 DNAJC9-AS1A6NH13 148 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 AIM2O14862 343 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TRAF3IP2O43734 574 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 ITM2AO43736 263 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 RAB36O95755 333 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 S100A3P33764 101 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 ERVS71-1P61550 626 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 RPS23P62266 143 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 BAMBIQ13145 260 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 HNRNPA0Q13151 305 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 CAMK2DQ13557 499 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TSTQ16762 297 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 LIN52Q52LA3 116 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 RPS26P11Q5JNZ5 115 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 RGS7BPQ6MZT1 257 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 USP51Q70EK9 711 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 H1FNTQ75WM6 255 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 DOK3Q7L591 496 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 SKA3Q8IX90 412 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 PAQR4Q8N4S7 273 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TCP10LQ8TDR4 215 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 UBLCP1Q8WVY7 318 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 TESCQ96BS2 214 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 CCDC115Q96NT0 180 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 PANX1Q96RD7 426 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 RHOXF2Q9BQY4 288 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 MMP26Q9NRE1 261 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 MED29Q9NX70 200 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 BTNL2Q9UIR0 455 aa8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF443Q9Y2A4 671 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-220ENST00000576940 DSPPQ9NZW4 1301 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 NOTCH1P46531 2555 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 LOC102725191A0A1B0GVB3 256 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 TPD52L2O43399 206 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 SERPINA5P05154 406 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 MDKP21741 143 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 OMGP23515 440 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 GATA3P23771 443 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 RBMXP38159 391 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 UFM1P61960 85 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 SMU1Q2TAY7 513 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 KLF17Q5JT82 389 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 HIST2H2BDQ6DRA6 164 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 LEG1Q6P5S2 330 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 NHLRC1Q6VVB1 395 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF627Q7L945 461 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 HDXQ7Z353 690 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 RETREG3Q86VR2 466 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 JAZF1Q86VZ6 243 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 UEVLDQ8IX04 471 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 LRRC34Q8IZ02 419 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 MIER2Q8N344 545 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 OR6N1Q8NGY5 312 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 SYNPRQ8TBG9 265 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 CCL17Q92583 94 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 RAB1CQ92928 201 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 APOPT1Q96IL0 206 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 FOXB1Q99853 325 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 DECR2Q9NUI1 292 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 UBAP1Q9NZ09 502 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 ARMCX1Q9P291 453 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 SLC7A8Q9UHI5 535 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 LEF1Q9UJU2 399 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 PRDM4Q9UKN5 801 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 NUP50Q9UKX7 468 aa8.59□□□□□ -1.03
NPLOC4-220ENST00000576940 IGKV1D-42A0A075B6H8 117 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 IGLV3-9A0A075B6K5 115 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF726A6NNF4 738 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 CLDN25C9JDP6 229 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 E9PBE3 544 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 AKAP8O43823 692 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 OR2T1O43869 369 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 UBL3O95164 117 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 LCKP06239 509 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 BCHEP06276 602 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 BPGMP07738 259 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 RNASE1P07998 156 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ETFAP13804 333 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 NQO1P15559 274 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF250P15622 560 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 MAKP20794 623 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 IL12AP29459 219 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 LSP1P33241 339 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SERPINB5P36952 375 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ANXA11P50995 505 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 MVDP53602 400 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SELENOVP59797 346 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 IL13RA1P78552 427 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 TEKQ02763 1124 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 GLO1Q04760 184 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 LARS2Q15031 903 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC9A3R2Q15599 337 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms