RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 HIVEP2P31629 2446 aa5.43□□□□□ -1.54
NUP88-212ENST00000576708 TLN2Q9Y4G6 2542 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CHD3Q12873 2000 aaKnown RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 CADP27708 2225 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CFAP73A6NFT4 308 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 LIPT2A6NK58 231 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 RNF212BA8MTL3 300 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 A8MV72 311 aaPredicted RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 NR5A2O00482 541 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TM9SF1O15321 606 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 ZNF208O43345 1280 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 FRS3O43559 492 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 DNPH1O43598 174 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 LGI1O95970 557 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 BCHEP06276 602 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 DBIP07108 87 aaKnown RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 IL7RP16871 459 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 RPS19P39019 145 aaKnown RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 ACAA2P42765 397 aaKnown RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 SLC1A3P43003 542 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 SELENOPP49908 381 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 MVDP53602 400 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TUBA1BP68363 451 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TUBA4AP68366 448 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 HOXC5Q00444 222 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 RAB35Q15286 201 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 NRF1Q16656 503 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 MST1LQ2TV78 715 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TMEM249Q2WGJ8 235 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TNFAIP8L3Q5GJ75 292 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CEP85LQ5SZL2 805 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 OTUD3Q5T2D3 398 aaPredicted RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 HHATQ5VTY9 493 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 NXNQ6DKJ4 435 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 KLHL17Q6TDP4 642 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CLEC2AQ6UVW9 174 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 ZNF836Q6ZNA1 936 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TUBA1AQ71U36 451 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 LINGO2Q7L985 606 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 AAED1Q7RTV5 226 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 SPATA19Q7Z5L4 167 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 PHC2Q8IXK0 858 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 KDM8Q8N371 416 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CLIP4Q8N3C7 705 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 MREGQ8N565 214 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 ARIH2OSQ8N7S6 290 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 OR9K2Q8NGE7 335 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 OR52P1PQ8NH57 321 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 Q8TCH9 128 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 STON2Q8WXE9 905 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 RAB24Q969Q5 203 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 DDIT4LQ96D03 193 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 FBXO17Q96EF6 278 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 AURKBQ96GD4 344 aaPredicted RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 ADAD1Q96M93 576 aaKnown RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 AMBRA1Q9C0C7 1298 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 MTHFD2LQ9H903 347 aaPredicted RBP5.42□□□□□ -1.54
NUP88-212ENST00000576708 CBLN4Q9NTU7 201 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 FAIMQ9NVQ4 179 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 ADPRHL2Q9NX46 363 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 MOKQ9UQ07 419 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 MGAT4BQ9UQ53 548 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 TRAPPC4Q9Y296 219 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 SLC9A8Q9Y2E8 581 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CHST2Q9Y4C5 530 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 CUBNO60494 3623 aa5.42□□□□□ -1.54
NUP88-212ENST00000576708 IGHV1-18A0A0C4DH31 117 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 CDHR4A6H8M9 788 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 AQP7P3A6NL99 342 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 FAAHO00519 579 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 RFXANKO14593 260 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 TLX2O43763 284 aaPredicted RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 EIF1BO60739 113 aaKnown RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 SNNO75324 88 aaPredicted RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 UPK3AO75631 287 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 INMTO95050 263 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 TFPTP0C1Z6 253 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 GYPEP15421 78 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 CXCR1P25024 350 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 MPGP29372 298 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 CRATP43155 626 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 P2RY4P51582 365 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 PRPS1P60891 318 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SLC9B1Q4ZJI4 515 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 C6orf52Q5T4I8 152 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 ATG16L1Q676U5 607 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 OR7E24Q6IFN5 339 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 PAQR6Q6TCH4 344 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 CCBE1Q6UXH8 406 aaPredicted RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 IL17RELQ6ZVW7 336 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SERPINA11Q86U17 422 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 GPAT4Q86UL3 456 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 EPHX4Q8IUS5 362 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 PEX5LQ8IYB4 626 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 PQLC1Q8N2U9 271 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 TRIML2Q8N7C3 387 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 OR9I1Q8NGQ6 314 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SPATA3Q8NHX4 192 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms