RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZNF223Q9UK11 482 aaPredicted RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 A0A1W2PR48 441 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 NUDT19A8MXV4 375 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 IFNA10P01566 189 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 IFNA4P05014 189 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 THEGLP0DJG4 465 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 NID1P14543 1247 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 CXCL3P19876 107 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 C5AR1P21730 350 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 LAIR2Q6ISS4 152 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 FBLIM1Q8WUP2 373 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 DAZLQ92904 295 aaKnown RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 Q96M85 177 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZDHHC5Q9C0B5 715 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 EHFQ9NZC4 300 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 RAB19A4D1S5 217 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR5K4A6NMS3 321 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 LPLP06858 475 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 CD14P08571 375 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 BSGP35613 385 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 BCL6P41182 706 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZFP36L2P47974 494 aaKnown RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC6A8P48029 635 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 IHHQ14623 411 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 CERS4Q9HA82 394 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 IL20Q9NYY1 176 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 GPR55Q9Y2T6 319 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 FITM1A5D6W6 292 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 SEC14L5O43304 696 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 PAPD4Q6PIY7 484 aaKnown RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 COMTD1Q86VU5 262 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF709Q8N972 641 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR4Q3Q8NH05 313 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 BMFQ96LC9 184 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 SDF2Q99470 211 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 WDR77Q9BQA1 342 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 WSB2Q9NYS7 404 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 PYCARD-AS1I3L0S3 204 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR2T1O43869 369 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 F3P13726 295 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 P2RX1P51575 399 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEFF1Q8IYR6 380 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC39A11Q8N1S5 342 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR52H1Q8NGJ2 320 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 PTDSS2Q9BVG9 487 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 HIST1H1CP16403 213 aaKnown RBP12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 CD79BP40259 229 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 MAGEB1P43366 347 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 UBE2KP61086 200 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 MEP1BQ16820 701 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 FBXL6Q8N531 539 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 AVL9Q8NBF6 648 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 ADAMTS18Q8TE60 1221 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 YIPF5Q969M3 257 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 PLEKHJ1Q9NW61 149 aa12.08□□□□□ -0.48
PCDHGB3-201ENST00000576222 CD3DP04234 171 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR4E1P0C645 316 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 DIO1P49895 249 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 PCBP3P57721 371 aaKnown RBP12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 LAIR1Q6GTX8 287 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 MDGA2Q7Z553 956 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 KIAA0907Q7Z7F0 614 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 CCDC71LQ8N9Z2 235 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR4C16Q8NGL9 310 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 MIB2Q96AX9 1013 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 GMEB2Q9UKD1 530 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC22A7Q9Y694 548 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 A0A0A6YYC8 382 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 A6NIZ1 184 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 I3L1I5 382 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 CTSAP10619 480 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 APEHP13798 732 aaKnown RBP12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 RAP1BP61224 184 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 RAP1AP62834 184 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 ACTBL2Q562R1 376 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 P4HA3Q7Z4N8 544 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 MCOLN1Q9GZU1 580 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 CPNE7Q9UBL6 633 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 VSTM2BA6NLU5 285 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 THBS1P07996 1170 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 CD80P33681 288 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms