RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SLC24A3Q9HC58 644 aa7.58□□□□□ -1.2
NUP88-211ENST00000575976 PARPBPQ9NWS1 579 aa7.58□□□□□ -1.2
NUP88-211ENST00000575976 JKAMPQ9P055 326 aa7.58□□□□□ -1.2
NUP88-211ENST00000575976 IL20RAQ9UHF4 553 aa7.58□□□□□ -1.2
NUP88-211ENST00000575976 OAZ3Q9UMX2 235 aa7.58□□□□□ -1.2
NUP88-211ENST00000575976 RCE1Q9Y256 329 aa7.58□□□□□ -1.2
NUP88-211ENST00000575976 NCOA6Q14686 2063 aaPredicted RBP7.58□□□□□ -1.2
NUP88-211ENST00000575976 LRBAP50851 2863 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 A0A1W2PRG6 482 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 ZNF726A6NNF4 738 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 H0YHG0 523 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 AKAP8O43823 692 aaKnown RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 SLC43A1O75387 559 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 SOX14O95416 240 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 PPP1R3DO95685 299 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 IGHMP01871 453 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 CD14P08571 375 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 GSTM3P21266 225 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 SLC6A6P31641 620 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 ASCL1P50553 236 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 DAP3P51398 398 aaKnown RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 RPL27P61353 136 aaKnown RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 ERVK-25P63136 954 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 RUNX1T1Q06455 604 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 LGALS3BPQ08380 585 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 TOP3AQ13472 1001 aaPredicted RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 CAMK2DQ13557 499 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 RCN1Q15293 331 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 SLC25A35Q3KQZ1 300 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 PHYHD1Q5SRE7 291 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 CARD17Q5XLA6 110 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 FAM122BQ7Z309 247 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 CLDN22Q8N7P3 220 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 OR8D4Q8NGM9 314 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 OR6X1Q8NH79 312 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 ASB10Q8WXI3 467 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 HDAC2Q92769 488 aaKnown RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 Q96M85 177 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 TSPAN32Q96QS1 320 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 OR2M2Q96R28 347 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 GPX7Q96SL4 187 aaPredicted RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 CIB1Q99828 191 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 KATNB1Q9BVA0 655 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 RBM24Q9BX46 236 aaKnown RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 POLDIP3Q9BY77 421 aaKnown RBP7.57□□□□□ -1.2
NUP88-211ENST00000575976 PLA2G12AQ9BZM1 189 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 GABARAPL1Q9H0R8 117 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 TXNIPQ9H3M7 391 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 ZNF556Q9HAH1 456 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 KCNJ16Q9NPI9 418 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 NRIP3Q9NQ35 241 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 SLC7A10Q9NS82 523 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 IL20Q9NYY1 176 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 KIF17Q9P2E2 1029 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 REV1Q9UBZ9 1251 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 ADAM18Q9Y3Q7 739 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 IER3IP1Q9Y5U9 82 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 CDH10Q9Y6N8 788 aa7.57□□□□□ -1.2
NUP88-211ENST00000575976 CENPEQ02224 2701 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 SETD2Q9BYW2 2564 aaPredicted RBP7.56□□□□□ -1.2
NUP88-211ENST00000575976 ICE1Q9Y2F5 2266 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 NPIPB13A6NJU9 1138 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 NPIPB4C9JG80 1138 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 MITFO75030 526 aaPredicted RBP7.56□□□□□ -1.2
NUP88-211ENST00000575976 UPK3AO75631 287 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 TRMUO75648 421 aaKnown RBP7.56□□□□□ -1.2
NUP88-211ENST00000575976 OSMP13725 252 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 ACADSP16219 412 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 ACVR1BP36896 505 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 RPS6KA3P51812 740 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 FOXG1P55316 489 aaPredicted RBP7.56□□□□□ -1.2
NUP88-211ENST00000575976 PPP2R2BQ00005 443 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 FAM27E3Q08E93 113 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 FAPQ12884 760 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 DAG1Q14118 895 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 TAF11Q15544 211 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 SLC36A3Q495N2 470 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 CLEC12AQ5QGZ9 265 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 KDM4DQ6B0I6 523 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 RPL13AP3Q6NVV1 102 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 DPY19L2P2Q6ZN68 376 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 LINGO2Q7L985 606 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 C20orf196Q8IYI0 205 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 TMEM123Q8N131 208 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 GABRG1Q8N1C3 465 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 UBE2J2Q8N2K1 259 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 ARIH2OSQ8N7S6 290 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 OR52L1Q8NGH7 329 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 OR4Q3Q8NH05 313 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 ZNF519Q8TB69 540 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 RNASE6Q93091 150 aaKnown RBP7.56□□□□□ -1.2
NUP88-211ENST00000575976 TMEM54Q969K7 222 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 ZNF566Q969W8 418 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 RASD2Q96D21 266 aa7.56□□□□□ -1.2
NUP88-211ENST00000575976 SLC25A44Q96H78 314 aaPredicted RBP7.56□□□□□ -1.2
NUP88-211ENST00000575976 ADAD1Q96M93 576 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms