RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 USP24Q9UPU5 2620 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 OR14I1A6ND48 311 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 NPIPB13A6NJU9 1138 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 TRIM64CA6NLI5 447 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 CLCA1A8K7I4 914 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 NPIPB4C9JG80 1138 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 ENTPD6O75354 484 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 BCL10O95999 233 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 TDGF1P3P51864 188 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 NUDT6P53370 316 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 NR1H2P55055 460 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 BIDP55957 195 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 TUBA4AP68366 448 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 RUNX1T1Q06455 604 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 ITGADQ13349 1161 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 KRTCAP3Q53RY4 240 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 LEG1Q6P5S2 330 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 CXXC5Q7LFL8 322 aaKnown RBP21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 JAZF1Q86VZ6 243 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 PM20D2Q8IYS1 436 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 BBS1Q8NFJ9 593 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 HCAR1Q9BXC0 346 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 FN3KQ9H479 309 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 ASF1BQ9NVP2 202 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 CLN6Q9NWW5 311 aa21.42■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF716A6NP11 495 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 ARHGEF9O43307 516 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 CYTIPO60759 359 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 AQP8O94778 261 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 ACVR2AP27037 513 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 POU4F3Q15319 338 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 CREB3L2Q70SY1 520 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 NPEPL1Q8NDH3 523 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 RNF128Q8TEB7 428 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 HDAC2Q92769 488 aaKnown RBP21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 PRRG4Q9BZD6 226 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 A0A087WXM4 84 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 OR6C68A6NDL8 312 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 PRR23D1E9PI22 279 aaPredicted RBP21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 XKRYO14609 159 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 PRR23D2P0DMB1 279 aaPredicted RBP21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 RASGEF1BQ0VAM2 473 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 TMEM201Q5SNT2 666 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 BPIFB6Q8NFQ5 453 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 OR9Q1Q8NGQ5 310 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF775Q96BV0 537 aaPredicted RBP21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF582Q96NG8 517 aaPredicted RBP21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 SLX1AQ9BQ83 275 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 SF3B5Q9BWJ5 86 aaKnown RBP21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 AMBNQ9NP70 447 aa21.41■■□□□ 1.02
ATPAF1-213ENST00000574428 KDM4EB2RXH2 506 aaPredicted RBP21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 XPNPEP2O43895 674 aa21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 PTGS2P35354 604 aa21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 CLDN17P56750 224 aa21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 OCLNQ16625 522 aa21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 RBM48Q5RL73 367 aaKnown RBP21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF385AQ96PM9 386 aaKnown RBP21.4■■□□□ 1.02
ATPAF1-213ENST00000574428 SLC1A7O00341 560 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 CLUP10909 449 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 PAICSP22234 425 aaKnown RBP21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC25A30Q5SVS4 291 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 AADACL4Q5VUY2 407 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 ADCK1Q86TW2 530 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 ZIC4Q8N9L1 334 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 PTP4A1Q93096 173 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 Q96MT0 163 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 DDOQ99489 341 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 ING1Q9UK53 422 aaPredicted RBP21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 ATRXP46100 2492 aa21.39■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC35F4A4IF30 521 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 A6NIZ1 184 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC22A20A6NK97 555 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 TTLL8A6PVC2 850 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 TGM6O95932 706 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 GYPBP06028 91 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 CRHBPP24387 322 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 ALDH3B2P48448 385 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 RAP1BP61224 184 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 RAP1AP62834 184 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 TEKQ02763 1124 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 SYT14Q8NB59 555 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 TRIB1Q96RU8 372 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 RHNO1Q9BSD3 238 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 FLVCR1Q9Y5Y0 555 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 SMIM31A0A1B0GVY4 71 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 PRSS37A4D1T9 235 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 SLC16A1P53985 500 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 CAMK2DQ13557 499 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 MEDAGQ5VYS4 303 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 CARD17Q5XLA6 110 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 FAM205BPQ63HN1 556 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 ZNF585AQ6P3V2 769 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 SYT4Q9H2B2 425 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 OR51V1Q9H2C8 321 aa21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 RPRD1BQ9NQG5 326 aaKnown RBP21.38■■□□□ 1.01
ATPAF1-213ENST00000574428 FAM20BO75063 409 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 TRMUO75648 421 aaKnown RBP21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 RENP00797 406 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 NXNL2Q5VZ03 156 aa21.37■■□□□ 1.01
ATPAF1-213ENST00000574428 NIPAL3Q6P499 406 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms