RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ZC3H12DA2A288 527 aaKnown RBP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 PDLIM1O00151 329 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 ZNF208O43345 1280 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 CNOT4O95628 575 aaKnown RBP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 INHBBP09529 407 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 PAX1P15863 534 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 FKBP2P26885 142 aaKnown RBP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 IFNGR2P38484 337 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 PTH2RP49190 550 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 H3F3AP84243 136 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 EGR4Q05215 589 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 OTUD3Q5T2D3 398 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 PRSS57Q6UWY2 283 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 BIVMQ86UB2 503 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 STK35Q8TDR2 534 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 HSD17B8Q92506 261 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 AKAP1Q92667 903 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 DDIT4LQ96D03 193 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 ZHX1-C8orf76Q96EF9 292 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 COX4I2Q96KJ9 171 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 KRCC1Q9NPI7 259 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 MEPEQ9NQ76 525 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-203ENST00000570676 TRAPPC4Q9Y296 219 aa13.31□□□□□ -0.28
RAB40B-203ENST00000570676 CADP27708 2225 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 TRAV36DV7A0A075B6V5 113 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ARRDC5A6NEK1 342 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 AHSA1O95433 338 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 IGHV3-9P01782 118 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 IFI30P13284 250 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 PEX2P28328 305 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 PRKCDQ05655 676 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 BSPH1Q075Z2 132 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 LRRC36Q1X8D7 754 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 C1orf140Q5VVS0 124 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ZNF770Q6IQ21 691 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 C5orf46Q6UWT4 87 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ZBTB49Q6ZSB9 765 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 MEX3DQ86XN8 651 aaKnown RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 CCDC103Q8IW40 242 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ZNF100Q8IYN0 542 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 CIARTQ8N365 385 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 C10orf53Q8N6V4 93 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ZNF433Q8N7K0 673 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ATG16L2Q8NAA4 619 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 AQP11Q8NBQ7 271 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 NEUROG1Q92886 237 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 APH1AQ96BI3 265 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 BPIFA2Q96DR5 249 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 KTI12Q96EK9 354 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 FAM46AQ96IP4 442 aaKnown RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 Q96MF0 132 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 FEVQ99581 238 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 USB1Q9BQ65 265 aaKnown RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 GABARAPL1Q9H0R8 117 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 C20orf141Q9NUB4 165 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 ZNF701Q9NV72 531 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 MALT1Q9UDY8 824 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 TMEM5Q9Y2B1 443 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 NOSIPQ9Y314 301 aaKnown RBP13.3□□□□□ -0.28
RAB40B-203ENST00000570676 NF1P21359 2839 aa13.3□□□□□ -0.28
RAB40B-203ENST00000570676 GPR171O14626 319 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 TMCC2O75069 709 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 NPIPB7O75200 414 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 GASTP01350 101 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 CD3EP07766 207 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 CBLP22681 906 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 GPR4P46093 362 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 RPS5P46782 204 aaKnown RBP13.29□□□□□ -0.28
RAB40B-203ENST00000570676 OMPP47874 163 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 OR2B6P58173 313 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 PPA1Q15181 289 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 STK11Q15831 433 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 KRTAP21-3Q3LHN1 58 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 OGFRL1Q5TC84 451 aaPredicted RBP13.29□□□□□ -0.28
RAB40B-203ENST00000570676 FBXW9Q5XUX1 488 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 PGBD2Q6P3X8 592 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 ZER1Q7Z7L7 766 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 CBR4Q8N4T8 237 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 KBTBD8Q8NFY9 601 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 GNPDA2Q8TDQ7 276 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 TMEM171Q8WVE6 324 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 NRG4Q8WWG1 115 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 GTPBP3Q969Y2 492 aaKnown RBP13.29□□□□□ -0.28
RAB40B-203ENST00000570676 SGTBQ96EQ0 304 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
RAB40B-203ENST00000570676 ZNF556Q9HAH1 456 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 SMURF2Q9HAU4 748 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 NGBQ9NPG2 151 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 MGAT4BQ9UQ53 548 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 FLVCR1Q9Y5Y0 555 aa13.29□□□□□ -0.28
RAB40B-203ENST00000570676 USF3Q68DE3 2245 aa13.28□□□□□ -0.28
RAB40B-203ENST00000570676 HTR3EA5X5Y0 456 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms