RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ATP6V1G2-DDX39BF2Z307 99 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 J3KTA2 159 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 FFAR1O14842 300 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 RNF13O43567 381 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 DCTN3O75935 186 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 CD8AP01732 235 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 HIST1H2ABP04908 130 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 TSPAN19P0C672 248 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 PAX7P23759 505 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 CDKN1AP38936 164 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 YAP1P46937 504 aaKnown RBP11.36□□□□□ -0.59
CNOT1-220ENST00000569916 CSNK1A1P48729 337 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 RPL18Q07020 188 aaKnown RBP11.36□□□□□ -0.59
CNOT1-220ENST00000569916 MELKQ14680 651 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 HIST3H2AQ7L7L0 130 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 RBM15BQ8NDT2 890 aaKnown RBP11.36□□□□□ -0.59
CNOT1-220ENST00000569916 OR6N1Q8NGY5 312 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 OR6X1Q8NH79 312 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 LIPHQ8WWY8 451 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 TMEM54Q969K7 222 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ADAD1Q96M93 576 aaKnown RBP11.36□□□□□ -0.59
CNOT1-220ENST00000569916 Q96MF0 132 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 LRRC37BQ96QE4 947 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 DHRS9Q9BPW9 319 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ULBP2Q9BZM5 246 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 GRIP2Q9C0E4 1043 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 B3GAT2Q9NPZ5 323 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ARL8BQ9NVJ2 186 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 FAIMQ9NVQ4 179 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ADA2Q9NZK5 511 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 RHCGQ9UBD6 479 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 EGFL7Q9UHF1 273 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ALPK2Q86TB3 2170 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 BLOC1S5-TXNDC5H3BN57 136 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 PRSS23O95084 383 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 FOSL1P15407 271 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 FUT1P19526 365 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 IFNA8P32881 189 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 ATP5J2P56134 94 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 LSM11P83369 360 aaKnown RBP eCLIP11.35□□□□□ -0.59
CNOT1-220ENST00000569916 FXNQ16595 210 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 C3orf36Q3SXR2 165 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 C11orf71Q6IPW1 123 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 FKBP9P1Q75LS8 142 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF627Q7L945 461 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 TSEN54Q7Z6J9 526 aaKnown RBP11.35□□□□□ -0.59
CNOT1-220ENST00000569916 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
CNOT1-220ENST00000569916 PGAM4Q8N0Y7 254 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 DEPDC4Q8N2C3 294 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 RNF148Q8N7C7 305 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 FAM169BQ8N8A8 192 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 ANKS4BQ8N8V4 417 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 FAM156AQ8NDB6 213 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 KATNB1Q9BVA0 655 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 TAGLN3Q9UI15 199 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
CNOT1-220ENST00000569916 ACANP16112 2415 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 F13BP05160 661 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 CELA3BP08861 270 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 CECR9P0C854 216 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 PGA4P0DJD7 388 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 PGA3P0DJD8 388 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 IFI30P13284 250 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 CBR1P16152 277 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 TTKP33981 857 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 AQP2P41181 271 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 NAAAQ02083 359 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 TRAM2Q15035 370 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 AGAP6Q5VW22 663 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 GLYATQ6IB77 296 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF544Q6NX49 715 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 MOSPD2Q8NHP6 518 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF566Q969W8 418 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 GTPBP3Q969Y2 492 aaKnown RBP11.34□□□□□ -0.59
CNOT1-220ENST00000569916 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 TRMT61AQ96FX7 289 aaKnown RBP11.34□□□□□ -0.59
CNOT1-220ENST00000569916 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-220ENST00000569916 C18orf12Q96KH6 178 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 CCT8L2Q96SF2 557 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 FOXB1Q99853 325 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 FNDC11Q9BVV2 318 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 MOV10Q9HCE1 1003 aaKnown RBP11.34□□□□□ -0.59
CNOT1-220ENST00000569916 CBLN4Q9NTU7 201 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 GLTPQ9NZD2 209 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 RPS6KA6Q9UK32 745 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 ATP23Q9Y6H3 246 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 ENPP4Q9Y6X5 453 aa11.34□□□□□ -0.59
CNOT1-220ENST00000569916 A0A1W2PRG6 482 aa11.33□□□□□ -0.6
CNOT1-220ENST00000569916 HTR3EA5X5Y0 456 aa11.33□□□□□ -0.6
CNOT1-220ENST00000569916 TRIM64A6NGJ6 449 aa11.33□□□□□ -0.6
CNOT1-220ENST00000569916 TRIM64BA6NI03 449 aa11.33□□□□□ -0.6
CNOT1-220ENST00000569916 BCL10O95999 233 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms