RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CDC14CA4D256 554 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 NOTOA8MTQ0 251 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 FTCDNL1E5RQL4 147 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PLPP3O14495 311 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PHYHO14832 338 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PLA2G10O15496 165 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 HPGDSO60760 199 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF354AO60765 605 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TMCC2O75069 709 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 UPK3AO75631 287 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ARL6IP5O75915 188 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TPPPO94811 219 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF432O94892 652 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TIAF1O95411 115 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CER1O95813 267 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RENP00797 406 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SYPP08247 313 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 MRPL3P09001 348 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF883P0CG24 379 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ALOX5APP20292 161 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 MYL9P24844 172 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 FKBP2P26885 142 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 AVPR2P30518 371 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RPS5P46782 204 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RFX2P48378 723 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 GDI2P50395 445 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CCR4P51679 360 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 HCCSP53701 268 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CAV3P56539 151 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RPL27P61353 136 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 MC2RQ01718 297 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 EGR3Q06889 387 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SLC3A1Q07837 685 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 INSL4Q14641 139 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ANGPT1Q15389 498 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 YIF1BQ5BJH7 314 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZMAT1Q5H9K5 638 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TEX30Q5JUR7 227 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 FAM209AQ5JX71 171 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 FAM69AQ5T7M9 428 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 C1orf140Q5VVS0 124 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 HACD4Q5VWC8 232 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 C1QL3Q5VWW1 255 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM81Q6P7N7 255 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CNIH2Q6PI25 160 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PAPD4Q6PIY7 484 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 FAM131AQ6UXB0 335 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 NHLRC1Q6VVB1 395 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF517Q6ZMY9 492 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PRR23CQ6ZRP0 262 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 NLRC3Q7RTR2 1065 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 NANOGNBQ7Z5D8 188 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 NR2C2APQ86WQ0 139 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PPP1R3BQ86XI6 285 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CDC20BQ86Y33 519 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PRSS58Q8IYP2 241 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 UBQLNLQ8IYU4 475 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RDH10Q8IZV5 341 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 OR6V1Q8N148 313 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 BMPERQ8N8U9 685 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZBTB44Q8NCP5 570 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 DUSP18Q8NEJ0 188 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 OR51L1Q8NGJ5 315 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 MFSD8Q8NHS3 518 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF519Q8TB69 540 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 IFI44Q8TCB0 444 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZPLD1Q8TCW7 415 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ELP5Q8TE02 316 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SMAP2Q8WU79 429 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RASD2Q96D21 266 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 PLPPR2Q96GM1 343 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZC3HAV1LQ96H79 300 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 MAP6Q96JE9 813 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CCDC74BQ96LY2 380 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ADAD1Q96M93 576 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 KLHL15Q96M94 604 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 CLUHP3Q96NS8 147 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TSPAN32Q96QS1 320 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TBX5Q99593 518 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SLC7A5P2Q9GIP4 190 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SLC22A4Q9H015 551 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TXNIPQ9H3M7 391 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 RERGLQ9H628 205 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TIGARQ9NQ88 270 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 POLE4Q9NR33 117 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 KLHL1Q9NR64 748 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SDHAF3Q9NRP4 125 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 INIPQ9NRY2 104 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 C14orf119Q9NWQ9 140 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 TAS2R10Q9NYW0 307 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 MYOTQ9UBF9 498 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 COMMD3Q9UBI1 195 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 C19orf25Q9UFG5 118 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 NXT1Q9UKK6 140 aaKnown RBP4.86□□□□□ -1.63
SF3B3-213ENST00000569687 COPS3Q9UNS2 423 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 B9D1Q9UPM9 204 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF281Q9Y2X9 895 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 SEC16AO15027 2179 aa4.86□□□□□ -1.63
SF3B3-213ENST00000569687 A0A0C4DFX4 3053 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms