RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
LINC00558-201ENST00000569422 JAM3Q9BX67 310 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 RXFP3Q9NSD7 469 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 GRHPRQ9UBQ7 328 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 PRODH2Q9UF12 536 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 SERTAD3Q9UJW9 196 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 SLC6A5Q9Y345 797 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 MTCH2Q9Y6C9 303 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 UNC13CQ8NB66 2214 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF264O43296 627 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 MAS1P04201 325 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 HIST1H2ABP04908 130 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 NPR2P20594 1047 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 IL12BP29460 328 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 LTBQ06643 244 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 POU4F2Q12837 409 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 KLHL26Q53HC5 615 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 OGFOD3Q6PK18 319 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 LINC00114Q6XXX2 140 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 LRRC69Q6ZNQ3 347 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 FCRLAQ7L513 359 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 HIST3H2AQ7L7L0 130 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 DPY19L4Q7Z388 723 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 SIAH3Q8IW03 269 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF527Q8NB42 609 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 POC1BQ8TC44 478 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 HIST1H2ACQ93077 130 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 DHRS9Q9BPW9 319 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 TWSG1Q9GZX9 223 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 NRIP3Q9NQ35 241 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 PLSCR4Q9NRQ2 329 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 KLHDC2Q9Y2U9 406 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 FRYLO94915 3013 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 A0A0A6YYJ9 748 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 PPM1BO75688 479 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 ARL6IP5O75915 188 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 ZFPL1O95159 310 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 FBXO45P0C2W1 286 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 MST1P26927 711 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 PSMD4P55036 377 aaKnown RBP7.96□□□□□ -1.13
LINC00558-201ENST00000569422 CLDN20P56880 219 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 SLC37A1P57057 533 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 ACTA2P62736 377 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 ACTG2P63267 376 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 S100A12P80511 92 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 RPL18Q07020 188 aaKnown RBP7.96□□□□□ -1.13
LINC00558-201ENST00000569422 EFR3AQ14156 821 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.96□□□□□ -1.13
LINC00558-201ENST00000569422 WBP2NLQ6ICG8 309 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 SLC35D2Q76EJ3 337 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 TRILQ7L0X0 811 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 SYT13Q7L8C5 426 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 OR14A16Q8NHC5 309 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 SLC2A12Q8TD20 617 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 LPAR4Q99677 370 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 KCNJ15Q99712 375 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 WDR76Q9H967 626 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 ING3Q9NXR8 418 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 KLHL21Q9UJP4 597 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 HSPB11Q9Y547 144 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 RNF215Q9Y6U7 377 aa7.96□□□□□ -1.13
LINC00558-201ENST00000569422 SEC14L5O43304 696 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF749O43361 778 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 ICMTO60725 284 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 SERPINA3P01011 423 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 NME1P15531 152 aaKnown RBP7.96□□□□□ -1.14
LINC00558-201ENST00000569422 SRMP19623 302 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 CXCR1P25024 350 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 RBMS1P29558 406 aaKnown RBP7.96□□□□□ -1.14
LINC00558-201ENST00000569422 RPS11P62280 158 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00558-201ENST00000569422 EGR4Q05215 589 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 FCN2Q15485 313 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF74Q16587 644 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 BTBD16Q32M84 506 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 FAAP20Q6NZ36 180 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 LHFPL2Q6ZUX7 228 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 LANCL3Q6ZV70 420 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PXKQ7Z7A4 578 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 TPRA1Q86W33 373 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 DUSP18Q8NEJ0 188 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 TAAR8Q969N4 342 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 SNX18Q96RF0 628 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 NUDT9Q9BW91 350 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 HAO2Q9NYQ3 351 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 TRIOBPQ9H2D6 2365 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 FAM172BPA6NC97 362 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PIN1P1O15428 100 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 CLPSP04118 112 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 FAM157BP0CG42 384 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 FOLR1P15328 257 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PRKCAP17252 672 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 RORAP35398 523 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 FASLGP48023 281 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 EFNA3P52797 238 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PRPS1P60891 318 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 RRAS2P62070 204 aaPredicted RBP7.96□□□□□ -1.14
LINC00558-201ENST00000569422 TRAM1Q15629 374 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 AANATQ16613 207 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 ARHGAP40Q5TG30 622 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms