RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 DHRS12A0PJE2 317 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 SH3PXD2BA1X283 911 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 DEFB108AA8MXU0 73 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 PDLIM1O00151 329 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 CDC42EP2O14613 210 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 ACOT8O14734 319 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 GSC2O15499 205 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 SIAH2O43255 324 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 IGHG1P01857 330 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 SLC9A3P48764 834 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 ZNF83P51522 516 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 NR1H2P55055 460 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 CTXN1P60606 82 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 PRPS1P60891 318 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 TUBA1BP68363 451 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 TUBA4AP68366 448 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 ARF1P84077 181 aaKnown RBP11.25□□□□□ -0.61
CDT1-203ENST00000569140 MYBPC1Q00872 1141 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 ACKR1Q16570 336 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 PHYHD1Q5SRE7 291 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 TUBA1AQ71U36 451 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 P2RY8Q86VZ1 359 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 WDFY1Q8IWB7 410 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 C17orf78Q8N4C9 275 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 OR1K1Q8NGR3 316 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 OR6X1Q8NH79 312 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 LIPHQ8WWY8 451 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 POP5Q969H6 163 aaKnown RBP11.25□□□□□ -0.61
CDT1-203ENST00000569140 SLC25A44Q96H78 314 aaPredicted RBP11.25□□□□□ -0.61
CDT1-203ENST00000569140 DHRS1Q96LJ7 313 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 TNFRSF13CQ96RJ3 184 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 ESRP2Q9H6T0 727 aaKnown RBP11.25□□□□□ -0.61
CDT1-203ENST00000569140 SLC17A5Q9NRA2 495 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 POMPQ9Y244 141 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 HIF3AQ9Y2N7 669 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 CRYBG3Q68DQ2 2970 aa11.25□□□□□ -0.61
CDT1-203ENST00000569140 FREM1Q5H8C1 2179 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 NBPF19A0A087WUL8 3843 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 UNC119BA6NIH7 251 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 GNGT2O14610 69 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 KLF4O43474 513 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 CIB2O75838 187 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 WNT11O96014 354 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 CD3EP07766 207 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 RAP2AP10114 183 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 ACVR1BP36896 505 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 IFNGR2P38484 337 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 SH3BGRP55822 239 aaPredicted RBP11.24□□□□□ -0.61
CDT1-203ENST00000569140 CD47Q08722 323 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 PPP1R8Q12972 351 aaKnown RBP11.24□□□□□ -0.61
CDT1-203ENST00000569140 TBRG1Q3YBR2 411 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 ZBED5Q49AG3 693 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 IQCCQ4KMZ1 466 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 ANKRD16Q6P6B7 361 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 TMPRSS11FQ6ZWK6 438 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 CDH24Q86UP0 819 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 SYT14Q8NB59 555 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 NOXO1Q8NFA2 376 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 FANK1Q8TC84 345 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 ASB10Q8WXI3 467 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
CDT1-203ENST00000569140 MUS81Q96NY9 551 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 REEP1Q9H902 201 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 GLTPQ9NZD2 209 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 STX18Q9P2W9 335 aaKnown RBP11.24□□□□□ -0.61
CDT1-203ENST00000569140 IL20RAQ9UHF4 553 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 ITGB1BP2Q9UKP3 347 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 SAMHD1Q9Y3Z3 626 aaKnown RBP11.24□□□□□ -0.61
CDT1-203ENST00000569140 U3KQV3 271 aa11.24□□□□□ -0.61
CDT1-203ENST00000569140 AQP12BA6NM10 295 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 EBAG9O00559 213 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 KRT36O76013 467 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 CCNB2O95067 398 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 CST1P01037 141 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 QDPRP09417 244 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 PGA4P0DJD7 388 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 PGA3P0DJD8 388 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 B4GALT1P15291 398 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 ACADSP16219 412 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 OMPP47874 163 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 RPL27P61353 136 aaKnown RBP11.23□□□□□ -0.61
CDT1-203ENST00000569140 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
CDT1-203ENST00000569140 ERVK-25P63136 954 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 RUNX1T1Q06455 604 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 BSPH1Q075Z2 132 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 ANKDD1AQ495B1 522 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 C1orf146Q5VVC0 180 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 PGM2L1Q6PCE3 622 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 ZNF813Q6ZN06 617 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 ZNF704Q6ZNC4 412 aaPredicted RBP11.23□□□□□ -0.61
CDT1-203ENST00000569140 SSX8Q7RTT4 187 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 PIWIL3Q7Z3Z3 882 aaKnown RBP11.23□□□□□ -0.61
CDT1-203ENST00000569140 AQP12AQ8IXF9 295 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 ADGRG5Q8IZF4 528 aa11.23□□□□□ -0.61
CDT1-203ENST00000569140 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms