RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 HLA-DPA1P20036 260 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 ADRA1AP35348 466 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 SNRNP35Q16560 246 aaKnown RBP1.07□□□□□ -2.24
CDH1-211ENST00000567320 SLC25A52Q3SY17 297 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 RABL6Q3YEC7 729 aaPredicted RBP1.07□□□□□ -2.24
CDH1-211ENST00000567320 ZFP1Q6P2D0 407 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 ZNF493Q6ZR52 646 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 RABEPKQ7Z6M1 372 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 MOB3BQ86TA1 216 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 CALHM1Q8IU99 346 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 VSTM4Q8IW00 320 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 KDM8Q8N371 416 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 OR13G1Q8NGZ3 307 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 LINC01560Q8TB33 94 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 AMDHD1Q96NU7 426 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 ANGPTL4Q9BY76 406 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 YY1AP1Q9H869 796 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 KLHL28Q9NXS3 571 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 SPASTQ9UBP0 616 aa1.07□□□□□ -2.24
CDH1-211ENST00000567320 PACSIN2Q9UNF0 486 aaPredicted RBP1.07□□□□□ -2.24
CDH1-211ENST00000567320 A0A1W2PNV4 684 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 CCDC182A6NF36 153 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 CTAGE5O15320 804 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 RGS16O15492 202 aaPredicted RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 RHOBTB1O94844 696 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 OXSR1O95747 527 aaPredicted RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 HLA-DPB1P04440 258 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 ETS1P14921 441 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 WARSP23381 471 aaKnown RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 GCAP28676 217 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 GDI2P50395 445 aaKnown RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 CRYBB1P53674 252 aaPredicted RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 RPS21P63220 83 aaKnown RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 TNFRSF17Q02223 184 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 GAMTQ14353 236 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 OXA1LQ15070 435 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 PDK1Q15118 436 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 POU2AF1Q16633 256 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 BEND3Q5T5X7 828 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 SAXO2Q658L1 398 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 FAM71F2Q6NXP2 309 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 ANKRD23Q86SG2 305 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 PLA2G4DQ86XP0 818 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 SLC35F2Q8IXU6 374 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 CLDN19Q8N6F1 224 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 ZNF680Q8NEM1 530 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 IPMKQ8NFU5 416 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 COQ8AQ8NI60 647 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 CREB3L1Q96BA8 519 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 SH3YL1Q96HL8 342 aaPredicted RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 EDEM2Q9BV94 578 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 FRMD8P1Q9BZ68 369 aaPredicted RBP1.06□□□□□ -2.24
CDH1-211ENST00000567320 THAP9Q9H5L6 903 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 SYNDIG1Q9H7V2 258 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 ISYNA1Q9NPH2 558 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 GIN1Q9NXP7 522 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 IL36GQ9NZH8 169 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 IL19Q9UHD0 177 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 TMCO1Q9UM00 188 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 CEMIPQ8WUJ3 1361 aa1.06□□□□□ -2.24
CDH1-211ENST00000567320 ZNF98A6NK75 572 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 POLR1CO15160 346 aaPredicted RBP1.05□□□□□ -2.24
CDH1-211ENST00000567320 SOCS1O15524 211 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 TGFAP01135 160 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 APCSP02743 223 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 RDXP35241 583 aaKnown RBP1.05□□□□□ -2.24
CDH1-211ENST00000567320 RORAP35398 523 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 ERVK-25P63136 954 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 AP1ARQ63HQ0 302 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 RAET1GQ6H3X3 334 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 UTS2BQ765I0 119 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 ABHD13Q7L211 337 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 CATSPER4Q7RTX7 472 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 ELMOD2Q8IZ81 293 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 STPG2Q8N412 459 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 ABHD3Q8WU67 409 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 FGF14Q92915 247 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 RNF2Q99496 336 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 RIT2Q99578 217 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 LZTS2Q9BRK4 669 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 FICDQ9BVA6 458 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 SGK2Q9HBY8 427 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 MRPL47Q9HD33 250 aaKnown RBP1.05□□□□□ -2.24
CDH1-211ENST00000567320 CTSFQ9UBX1 484 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 RASD1Q9Y272 281 aa1.05□□□□□ -2.24
CDH1-211ENST00000567320 CENPJQ9HC77 1338 aaPredicted RBP1.05□□□□□ -2.24
CDH1-211ENST00000567320 CCER2I3L3R5 266 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 TNNI3P19429 210 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 SLC2A5P22732 501 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 IL12AP29459 219 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 DDOSTP39656 456 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 CXCL12P48061 93 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 CARD16Q5EG05 197 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 PRSS58Q8IYP2 241 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 OR5M1Q8NGP8 315 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 SGK3Q96BR1 496 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 C14orf79Q96F83 325 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 SAMD8Q96LT4 415 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 ATP6V0BQ99437 205 aa1.04□□□□□ -2.24
CDH1-211ENST00000567320 TMEM117Q9H0C3 514 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms