RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SERPINA12Q8IW75 414 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ZNF614Q8N883 585 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 TMEM52Q8NDY8 209 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 OR51L1Q8NGJ5 315 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 PCNPQ8WW12 178 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 GINS4Q9BRT9 223 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ADAM18Q9Y3Q7 739 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 A6NCN8 305 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 C2orf74A8MZ97 194 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 TOR1AO14656 332 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 TNFRSF10CO14798 259 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 UBBP0CG47 229 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 UBCP0CG48 685 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ADRA2CP18825 462 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ITPKBP27987 946 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 RPS27AP62979 156 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 UBA52P62987 128 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 EIF2B5Q13144 721 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 NFATC4Q14934 902 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 C12orf76Q8N812 135 aaPredicted RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ZNRF4Q8WWF5 429 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ADAD1Q96M93 576 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 VSTM2LQ96N03 204 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 ARL6Q9H0F7 186 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 CDCP1Q9H5V8 836 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 Q9N2J8 555 aa19.67■□□□□ 0.74
SPSB3-208ENST00000566339 MRM2Q9UI43 246 aaKnown RBP19.67■□□□□ 0.74
SPSB3-208ENST00000566339 SYNDIG1LA6NDD5 238 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 GGT3PA6NGU5 568 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 SERINC4A6NH21 518 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 RFPL4AA6NLU0 287 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 D6RAR5 112 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 RFPL4AL1F8VTS6 287 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 OR10H2O60403 315 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 ADH7P40394 386 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 FGL1Q08830 312 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 CCINQ13939 588 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 CSRP2Q16527 193 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 PCGF3Q3KNV8 242 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 LIPNQ5VXI9 398 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 LEG1Q6P5S2 330 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 TSSK4Q6SA08 328 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 FAM122BQ7Z309 247 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 LRRC75AQ8NAA5 344 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 OR4C16Q8NGL9 310 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 OR14C36Q8NHC7 312 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 ADAMTS18Q8TE60 1221 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 FGF13Q92913 245 aa19.66■□□□□ 0.74
SPSB3-208ENST00000566339 GCDHQ92947 438 aaPredicted RBP19.66■□□□□ 0.74
SPSB3-208ENST00000566339 A0A0D9SG52 128 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SLC22A23A1A5C7 686 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 OR4C45A6NMZ5 311 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 H3BUI4 141 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 CDC40O60508 579 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SRPX2O60687 465 aaPredicted RBP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 PMS2P2O95744 297 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SDHAP31040 664 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 ACTBP60709 375 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 ACTG1P63261 375 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SRSF4Q08170 494 aaKnown RBP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 LPCAT3Q6P1A2 487 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 TMPRSS12Q86WS5 348 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 STPG2Q8N412 459 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 OR1E3Q8WZA6 343 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 C3orf49Q96BT1 292 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 CXorf58Q96LI9 332 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 WDR92Q96MX6 357 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SLCO5A1Q9H2Y9 848 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 APMAPQ9HDC9 416 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 TMEM74BQ9NUR3 256 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 FRRS1LQ9P0K9 344 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 TSPAN4O14817 238 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 ARPC5O15511 151 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 IGKV1D-16P01601 117 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 TNFRSF4P43489 277 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 CLDN12P56749 244 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 ERVK-25P63136 954 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 COL9A2Q14055 689 aaPredicted RBP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 MCHR2Q969V1 340 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SLC25A21Q9BQT8 299 aaPredicted RBP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 SCPEP1Q9HB40 452 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 ZDHHC4Q9NPG8 344 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 PRDM6Q9NQX0 595 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 CDV3Q9UKY7 258 aaKnown RBP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 MRPS2Q9Y399 296 aaKnown RBP19.65■□□□□ 0.74
SPSB3-208ENST00000566339 MTCH2Q9Y6C9 303 aa19.65■□□□□ 0.74
SPSB3-208ENST00000566339 A0A0J9YY10 115 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 ZNF860A6NHJ4 632 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 NARSO43776 548 aaKnown RBP19.64■□□□□ 0.73
SPSB3-208ENST00000566339 EML2O95834 649 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 HPP00738 406 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 CSTAP01040 98 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 LPLP06858 475 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 MGMTP16455 207 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 CENPAP49450 140 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 ADPRHP54922 357 aa19.64■□□□□ 0.73
SPSB3-208ENST00000566339 IGLV3-21P80748 117 aaPredicted RBP19.64■□□□□ 0.73
SPSB3-208ENST00000566339 DBPQ10586 325 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms