RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 C9JVG2 144 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 KMOO15229 486 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 SOCS5O75159 536 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 FADS2O95864 444 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 LGI1O95970 557 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 MT-ND1P03886 318 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 PTPN6P29350 595 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ART1P52961 327 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CDH11P55287 796 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 RAB25P57735 213 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ARPC4P59998 168 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 SEC61A1P61619 476 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 VBP1P61758 197 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 POLR2LP62875 67 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 RPS21P63220 83 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 RPP38P78345 283 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ARMCX4Q5H9R4 360 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 LIPJQ5W064 366 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 GCNT7Q6ZNI0 430 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CYP4Z1Q86W10 505 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 OR9Q1Q8NGQ5 310 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ANGPTL6Q8NI99 470 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CNIH3Q8TBE1 160 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 RNF128Q8TEB7 428 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 WBP2Q969T9 261 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ST6GALNAC6Q969X2 333 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 MOAP1Q96BY2 351 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 TRNT1Q96Q11 434 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 NEK6Q9HC98 313 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 KLHL1Q9NR64 748 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 THUMPD1Q9NXG2 353 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 PDP1Q9P0J1 537 aaPredicted RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 IL17CQ9P0M4 197 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF282Q9UDV7 671 aaPredicted RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 IKZF3Q9UKT9 509 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ITM2BQ9Y287 266 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 V9GYQ6 96 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ZFC3H1O60293 1989 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CROCCQ5TZA2 2017 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 MYOFQ9NZM1 2061 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 DOCK4Q8N1I0 1966 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 IGKV2D-30A0A075B6S6 120 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 TRAV34A0A0B4J273 112 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 IQCMA0A1B0GVH7 501 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 NCF1BA6NI72 391 aaPredicted RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CENPXA8MT69 81 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 NCF1CA8MVU1 366 aaPredicted RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 NIPSNAP2O75323 286 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 WBP4O75554 376 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CCNKO75909 580 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CD22P20273 847 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 FMO3P31513 532 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 HNF4AP41235 474 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CSKP41240 450 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CLDN6P56747 220 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CDC42P60953 191 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 NCS1P62166 190 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 IHHQ14623 411 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 RSBN1Q5VWQ0 802 aaPredicted RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 TMEM215Q68D42 235 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 TMEM179BQ7Z7N9 219 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 RAB43Q86YS6 212 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 UBQLNLQ8IYU4 475 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ENTHD1Q8IYW4 607 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 STX19Q8N4C7 294 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 LINC00471Q8N535 108 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 FAM86B1Q8N7N1 296 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF675Q8TD23 568 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 SENP5Q96HI0 755 aaPredicted RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 CEP19Q96LK0 163 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 LYSMD1Q96S90 227 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 EGFL8Q99944 293 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 SLC30A2Q9BRI3 323 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 DOHHQ9BU89 302 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 GON7Q9BXV9 100 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ELOVL6Q9H5J4 265 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF556Q9HAH1 456 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ISYNA1Q9NPH2 558 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ABCB10Q9NRK6 738 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 ZFP57Q9NU63 452 aa3.72□□□□□ -1.81
LINC00561-201ENST00000565815 MRPL39Q9NYK5 338 aaKnown RBP3.72□□□□□ -1.81
LINC00561-201ENST00000565815 LRRK1Q38SD2 2015 aa3.71□□□□□ -1.81
LINC00561-201ENST00000565815 DMXL1Q9Y485 3027 aa3.71□□□□□ -1.81
LINC00561-201ENST00000565815 KNTC1P50748 2209 aa3.71□□□□□ -1.81
LINC00561-201ENST00000565815 IGSF10Q6WRI0 2623 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 HELZ2Q9BYK8 2649 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GCN1Q92616 2671 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 KCNE1BA0A087WTH5 132 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 EFCAB7A8K855 629 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CCRL2O00421 344 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 TAPBPO15533 448 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 TBL1XO60907 577 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SCN2BO60939 215 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SNAPC5O75971 98 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PDE9AO76083 593 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 WDPCPO95876 746 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 YES1P07947 543 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 RHOCP08134 193 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 HIST1H2AGP0C0S8 130 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 OR2T7P0C7T2 308 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms