RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CFTRP13569 1480 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 IGSF9BQ9UPX0 1349 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 B4GALT5O43286 388 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 BGLAPP02818 100 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 DUSP3P51452 185 aaPredicted RBP2.28□□□□□ -2.04
PALB2-203ENST00000565038 NCBP2P52298 156 aaKnown RBP eCLIP2.28□□□□□ -2.04
PALB2-203ENST00000565038 CRYBB1P53674 252 aaPredicted RBP2.28□□□□□ -2.04
PALB2-203ENST00000565038 CDK16Q00536 496 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 NCBP1Q09161 790 aaKnown RBP2.28□□□□□ -2.04
PALB2-203ENST00000565038 AQP6Q13520 282 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 UBE2SQ16763 222 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 KLHL38Q2WGJ6 581 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 PDZK1Q5T2W1 519 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 SLC25A24Q6NUK1 477 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 C19orf35Q6ZS72 473 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 FAM110BQ8TC76 370 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 PYROXD1Q8WU10 500 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 EMG1Q92979 244 aaKnown RBP2.28□□□□□ -2.04
PALB2-203ENST00000565038 RIOK1Q9BRS2 568 aaKnown RBP2.28□□□□□ -2.04
PALB2-203ENST00000565038 ING2Q9H160 280 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 UGT1A7Q9HAW7 530 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 UGT1A10Q9HAW8 530 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 UGT1A8Q9HAW9 530 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 ZNF222Q9UK12 451 aa2.28□□□□□ -2.04
PALB2-203ENST00000565038 PTBP2Q9UKA9 531 aaKnown RBP2.28□□□□□ -2.04
PALB2-203ENST00000565038 MRC2Q9UBG0 1479 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 LRP4O75096 1905 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 COL1A2P08123 1366 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 CARMIL3Q8ND23 1372 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 IGKV1D-17A0A075B6S4 117 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 IGKV1D-13A0A0B4J2D9 117 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 CCDC182A6NF36 153 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 COLCA2A8K830 154 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 ANGPT2O15123 496 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 NOL3O60936 208 aaKnown RBP2.27□□□□□ -2.05
PALB2-203ENST00000565038 SCGNO76038 276 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 ZDHHC11BP0C7U3 371 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 IGKV1-13P0DP09 117 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 SLC2A5P22732 501 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 OPRD1P41143 372 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 GYG1P46976 350 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 KLHL30Q0D2K2 578 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 TTLL9Q3SXZ7 439 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 FILIP1LQ4L180 1135 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 VAX1Q5SQQ9 334 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 NANOGP8Q6NSW7 305 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 UTS2BQ765I0 119 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 NUDCD3Q8IVD9 361 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 MAGEE2Q8TD90 523 aaPredicted RBP2.27□□□□□ -2.05
PALB2-203ENST00000565038 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 GEMIN6Q8WXD5 167 aaKnown RBP2.27□□□□□ -2.05
PALB2-203ENST00000565038 RLN3Q8WXF3 142 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.27□□□□□ -2.05
PALB2-203ENST00000565038 SYAP1Q96A49 352 aaPredicted RBP2.27□□□□□ -2.05
PALB2-203ENST00000565038 MS4A4EQ96PG1 132 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 GABARAPL3Q9BY60 117 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 ADAP2Q9NPF8 381 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 CGNQ9P2M7 1197 aaKnown RBP2.27□□□□□ -2.05
PALB2-203ENST00000565038 HMGXB3Q12766 1538 aa2.27□□□□□ -2.05
PALB2-203ENST00000565038 SOGA1O94964 1423 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 MSH6P52701 1360 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 MN1Q10571 1320 aaPredicted RBP2.26□□□□□ -2.05
PALB2-203ENST00000565038 PRPS2P11908 318 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 OMGP23515 440 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 NPY1RP25929 384 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 ATP1B3P54709 279 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 SCRN3Q0VDG4 424 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 NCCRP1Q6ZVX7 275 aaPredicted RBP2.26□□□□□ -2.05
PALB2-203ENST00000565038 ZNF679Q8IYX0 411 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 LYPD1Q8N2G4 141 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 OR5W2Q8NH69 310 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 SYNPRQ8TBG9 265 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 SGK3Q96BR1 496 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 MED8Q96G25 268 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 ZNF578Q96N58 590 aaPredicted RBP2.26□□□□□ -2.05
PALB2-203ENST00000565038 ZNF641Q96N77 438 aaPredicted RBP2.26□□□□□ -2.05
PALB2-203ENST00000565038 MTMR9Q96QG7 549 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 OR2A5Q96R48 311 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 MRPL47Q9HD33 250 aaKnown RBP2.26□□□□□ -2.05
PALB2-203ENST00000565038 SIRT7Q9NRC8 400 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 EXD2Q9NVH0 621 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 CD84Q9UIB8 345 aa2.26□□□□□ -2.05
PALB2-203ENST00000565038 PACSIN2Q9UNF0 486 aaPredicted RBP2.26□□□□□ -2.05
PALB2-203ENST00000565038 CEMIPQ8WUJ3 1361 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 THOC2Q8NI27 1593 aaKnown RBP2.25□□□□□ -2.05
PALB2-203ENST00000565038 PEG3Q9GZU2 1588 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 A0A1B0GVI7 797 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 A0A1W2PP18 115 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 INS-IGF2F8WCM5 200 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 SMIM10L1P0DMW3 83 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 TCN1P20061 433 aaPredicted RBP2.25□□□□□ -2.05
PALB2-203ENST00000565038 RORAP35398 523 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 GRIA1P42261 906 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 GPR6P46095 362 aaPredicted RBP2.25□□□□□ -2.05
PALB2-203ENST00000565038 NPBWR2P48146 333 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 SUB1P53999 127 aaKnown RBP eCLIP2.25□□□□□ -2.05
PALB2-203ENST00000565038 RPS21P63220 83 aaKnown RBP2.25□□□□□ -2.05
PALB2-203ENST00000565038 SLC7A9P82251 487 aa2.25□□□□□ -2.05
PALB2-203ENST00000565038 TRIM40Q6P9F5 258 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms