RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 FAM76AQ8TAV0 307 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 BCL2L2Q92843 193 aaPredicted RBP4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 SLC25A28Q96A46 364 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 PPCDCQ96CD2 204 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 LRRC58Q96CX6 371 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 FAM120BQ96EK7 910 aaKnown RBP4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 STACQ99469 402 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 ERP44Q9BS26 406 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 NAA11Q9BSU3 229 aaPredicted RBP4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 LAT2Q9GZY6 243 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF665Q9H7R5 613 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 CRLF2Q9HC73 371 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 CTPS2Q9NRF8 586 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF275Q9NSD4 429 aaPredicted RBP4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 ACER3Q9NUN7 267 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM181Q9P2C4 612 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 CHRNA9Q9UGM1 479 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 FAF1Q9UNN5 650 aaPredicted RBP4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 TRAPPC4Q9Y296 219 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 HDGFL3Q9Y3E1 203 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 KCNE3Q9Y6H6 103 aa4.4□□□□□ -1.71
TUBGCP4-209ENST00000564511 IGHV2OR16-5A0A0B4J2B6 119 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF587BE7ETH6 402 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 NPIPB9F8W1W9 429 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CCDC188H7C350 402 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ANKRD28O15084 1053 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 FCMRO60667 390 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CSTAP01040 98 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 IGKV3-15P01624 115 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 IGLV1-44P01699 117 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ENO1P06733 434 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CBR1P16152 277 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 TAC1P20366 129 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 IMPDH1P20839 514 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 LMO1P25800 156 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 FKBP2P26885 142 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 GCH1P30793 250 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 PAFAH1B1P43034 410 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ALDH3B1P43353 468 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ASMTP46597 345 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 EVX1P49640 407 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 FOXA1P55317 472 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 PKNOX1P55347 436 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 SLC35A1P78382 337 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 POU3F1Q03052 451 aaPredicted RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 NPRL3Q12980 569 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 LCP2Q13094 533 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 SKP2Q13309 424 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 GPR68Q15743 365 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 C3orf36Q3SXR2 165 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 AVPI1Q5T686 147 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 REP15Q6BDI9 236 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 EIF3MQ7L2H7 374 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF572Q7Z3I7 529 aaPredicted RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 GPAT4Q86UL3 456 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MYPOPQ86VE0 399 aaPredicted RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 LRRC8AQ8IWT6 810 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 SYT14Q8NB59 555 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CLRN3Q8NCR9 226 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 IL17RDQ8NFM7 739 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 OR9K2Q8NGE7 335 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CLHC1Q8NHS4 586 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 C17orf50Q8WW18 174 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 YIPF5Q969M3 257 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM45BQ96B21 275 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMIGD2Q96BF3 282 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 RAB39BQ96DA2 213 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF385AQ96PM9 386 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 TSSK3Q96PN8 268 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF317Q96PQ6 595 aaPredicted RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM237Q96Q45 408 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ALKBH3Q96Q83 286 aaPredicted RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 GPA33Q99795 319 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 SH3GL3Q99963 347 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CCDC106Q9BWC9 280 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF416Q9BWM5 594 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ACTRT3Q9BYD9 372 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MRPL37Q9BZE1 423 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MMP27Q9H306 513 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 REEP4Q9H6H4 257 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZMAT3Q9HA38 289 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 NOX3Q9HBY0 568 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MOV10Q9HCE1 1003 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MID1IP1Q9NPA3 183 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 GRHL1Q9NZI5 618 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 CRNNQ9UBG3 495 aaPredicted RBP4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF69Q9UC07 566 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 OPN4Q9UHM6 478 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 BAIAP2L1Q9UHR4 511 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 KCNE5Q9UJ90 142 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MID2Q9UJV3 735 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 MKLN1Q9UL63 735 aa4.39□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMED7-TICAM2A0A0A6YYA0 188 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 ARPC4-TTLL3A0A0A6YYG9 625 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 M0QZ24 198 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 SCAMP2O15127 329 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 TBX19O60806 448 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 CRCPO75575 148 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms