RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 PARP8Q8N3A8 854 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 IQCF1Q8N6M8 205 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 CLEC18CQ8NCF0 446 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 OR4Q3Q8NH05 313 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 OR6X1Q8NH79 312 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 ZNF519Q8TB69 540 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 ASB5Q8WWX0 329 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 DNAJC9Q8WXX5 260 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 APH1AQ96BI3 265 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 Q96M85 177 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 RBM4BQ9BQ04 359 aaKnown RBP13.73□□□□□ -0.21
CDH11-209ENST00000564317 C9orf16Q9BUW7 83 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 IFT27Q9BW83 186 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 RBM4Q9BWF3 364 aaKnown RBP13.73□□□□□ -0.21
CDH11-209ENST00000564317 TSSK6Q9BXA6 273 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 PIGMQ9H3S5 423 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 PLSCR4Q9NRQ2 329 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 KRT84Q9NSB2 600 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 USE1Q9NZ43 259 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 COQ3Q9NZJ6 369 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 JKAMPQ9P055 326 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 IER3IP1Q9Y5U9 82 aa13.73□□□□□ -0.21
CDH11-209ENST00000564317 UBR5O95071 2799 aaPredicted RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 TEX13CA0A0J9YWL9 993 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 EEF1E1-BLOC1S5C9J1V9 151 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 BHLHE40O14503 412 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 CASQ2O14958 399 aaPredicted RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 EEF1E1O43324 174 aaKnown RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 AKAP8O43823 692 aaKnown RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 UPK3AO75631 287 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 AGFG2O95081 481 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 ATP6V1G2O95670 118 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 ALPLP05186 524 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 RPL27P61353 136 aaKnown RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 SLC34A1Q06495 639 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 RIPK1Q13546 671 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 MESTQ5EB52 335 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 PHYHD1Q5SRE7 291 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 TSPO2Q5TGU0 170 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 RPL13AP3Q6NVV1 102 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 ZNF474Q6S9Z5 364 aaPredicted RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 LUZP2Q86TE4 346 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 ZNF100Q8IYN0 542 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 ZNF808Q8N4W9 903 aaPredicted RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 OR52L1Q8NGH7 329 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 LILRB4Q8NHJ6 448 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 MAGEE2Q8TD90 523 aaPredicted RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 HDAC2Q92769 488 aaKnown RBP13.72□□□□□ -0.21
CDH11-209ENST00000564317 EME1Q96AY2 570 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 RASD2Q96D21 266 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 SLC7A10Q9NS82 523 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 PARPBPQ9NWS1 579 aa13.72□□□□□ -0.21
CDH11-209ENST00000564317 NKX2-6A6NCS4 301 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 WIPF3A6NGB9 483 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 ZNF726A6NNF4 738 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 H3BN98 237 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 MSTNO14793 375 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 SLC43A1O75387 559 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 TRMUO75648 421 aaKnown RBP13.71□□□□□ -0.21
CDH11-209ENST00000564317 TXNDC12O95881 172 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 PGA4P0DJD7 388 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 PGA3P0DJD8 388 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 POU1F1P28069 291 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 ACVR1BP36896 505 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 TAF11Q15544 211 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 LRRC36Q1X8D7 754 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 SLC25A35Q3KQZ1 300 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 OGFRL1Q5TC84 451 aaPredicted RBP13.71□□□□□ -0.21
CDH11-209ENST00000564317 ZBTB49Q6ZSB9 765 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 LINGO2Q7L985 606 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 C20orf196Q8IYI0 205 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 FAM26EQ8N5C1 309 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 TEX47Q8TBZ9 253 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 ADAD1Q96M93 576 aaKnown RBP13.71□□□□□ -0.21
CDH11-209ENST00000564317 ZNF570Q96NI8 536 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 ERMAPQ96PL5 475 aaPredicted RBP13.71□□□□□ -0.21
CDH11-209ENST00000564317 SLCO5A1Q9H2Y9 848 aa13.71□□□□□ -0.21
CDH11-209ENST00000564317 FOXD3Q9UJU5 478 aaPredicted RBP13.71□□□□□ -0.21
CDH11-209ENST00000564317 INTS1Q8N201 2190 aaKnown RBP13.71□□□□□ -0.22
CDH11-209ENST00000564317 A8MXE2 369 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 H7C1C5 153 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 IMPA2O14732 288 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 ARPC3O15145 178 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 APEHP13798 732 aaKnown RBP13.7□□□□□ -0.22
CDH11-209ENST00000564317 ACADSP16219 412 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 AGAP20933 346 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 EPHA2P29317 976 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 SDHAP31040 664 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 POLR2IP36954 125 aaKnown RBP13.7□□□□□ -0.22
CDH11-209ENST00000564317 RPS6KA3P51812 740 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 CRISP1P54107 249 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 FOXG1P55316 489 aaPredicted RBP13.7□□□□□ -0.22
CDH11-209ENST00000564317 LCN6P62502 163 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
CDH11-209ENST00000564317 GINS1Q14691 196 aa13.7□□□□□ -0.22
CDH11-209ENST00000564317 PGGHGQ32M88 737 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms