RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ABHD10Q9NUJ1 306 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 C1orf123Q9NWV4 160 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 FLRT1Q9NZU1 646 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 MIOXQ9UGB7 285 aa4.28□□□□□ -1.72
SMG1-207ENST00000563235 CCNL1Q9UK58 526 aaPredicted RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 C14orf166Q9Y224 244 aaKnown RBP4.28□□□□□ -1.72
SMG1-207ENST00000563235 TGIF2-C20orf24A0A0A6YYL0 155 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 B4DGG1 531 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 CCL24O00175 119 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 AP4M1O00189 453 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 IMPA2O14732 288 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 CTSVO60911 334 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 OR2J2O76002 312 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 HTR1AP08908 422 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 COX4I1P13073 169 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 RAB6AP20340 208 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 CEACAM8P31997 349 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 GPR1P46091 355 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 RABGGTBP53611 331 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ERVPABLB-1P60509 514 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TFAMQ00059 246 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 EIF4HQ15056 248 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 ARMCX4Q5H9R4 360 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 C22orf42Q6IC83 251 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 KYAT3Q6YP21 454 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 CCDC190Q86UF4 302 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 XYLT1Q86Y38 959 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TRIM48Q8IWZ4 208 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TP53INP2Q8IXH6 220 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 STPG2Q8N412 459 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 FAM109AQ8N4B1 249 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TMEM161BQ8NDZ6 487 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 NFAM1Q8NET5 270 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 LRRC15Q8TF66 581 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TMEM234Q8WY98 164 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 OR5P2Q8WZ92 322 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ZBED6CLQ96FA7 236 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 ZNF582Q96NG8 517 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 SORCS2Q96PQ0 1159 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 CADM1Q9BY67 442 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 KATNBL1Q9H079 304 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 FAM234AQ9H0X4 552 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ING2Q9H160 280 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SYT4Q9H2B2 425 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ANKRD19PQ9H560 264 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SLC17A5Q9NRA2 495 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 IMPAD1Q9NX62 359 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SLC9A2Q9UBY0 812 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ZNF391Q9UJN7 358 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 OR52A1Q9UKL2 312 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SLC7A11Q9UPY5 501 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 RNF6Q9Y252 685 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 MTCH2Q9Y6C9 303 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 RGPD8O14715 1765 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 MRC1P22897 1456 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 C4AP0C0L4 1744 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 C4BP0C0L5 1744 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 A0A1B0GUL6 1792 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SSU72P8A0A1W2PR75 194 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SLC22A1O15245 554 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 IL18BPO95998 194 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 MBPP02686 304 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 WNT2P09544 360 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ETFAP13804 333 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SNRPBP14678 240 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 IVDP26440 423 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 RPL10P27635 214 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 ITPKBP27987 946 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 DUTP33316 252 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 MATKP42679 507 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 HTR5AP47898 357 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 NUMBP49757 651 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 CTSCP53634 463 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TAS2R39P59534 338 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 RPS7P62081 194 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 ZXDAP98168 799 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 POU6F1Q14863 301 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SLC22A6Q4U2R8 563 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 HP1BP3Q5SSJ5 553 aaPredicted RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 TAPT1Q6NXT6 567 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 SCIMPQ6UWF3 145 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 FAM126BQ8IXS8 530 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 EIF4E3Q8N5X7 224 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 OR10V1Q8NGI7 309 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 OR2Y1Q8NGV0 311 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 OR2T11Q8NH01 316 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ZNF398Q8TD17 642 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 GATAD1Q8WUU5 269 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ZC3HAV1LQ96H79 300 aaKnown RBP4.27□□□□□ -1.73
SMG1-207ENST00000563235 FOPNLQ96NB1 174 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 BIRC8Q96P09 236 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 DOK1Q99704 481 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 TIMP4Q99727 224 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 MRIQ9BWK5 157 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 B3GAT2Q9NPZ5 323 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 IL17RBQ9NRM6 502 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 C2orf42Q9NWW7 574 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 FRRS1LQ9P0K9 344 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 VPREB3Q9UKI3 123 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 ECM29Q5VYK3 1845 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 427.5 ms