RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR14A2Q96R54 314 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 SOSTQ9BQB4 213 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 TXNIPQ9H3M7 391 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 METTL7AQ9H8H3 244 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 SLC39A1Q9NY26 324 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 ING1Q9UK53 422 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-203ENST00000563226 WIF1Q9Y5W5 379 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 LINC00854A0A1B0GVQ3 168 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 PRSS37A4D1T9 235 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 EFNA2O43921 213 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 CYC1P08574 325 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 COX6A1P12074 109 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 CFL1P23528 166 aaKnown RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 ACP1P24666 158 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 INSM1Q01101 510 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 NTRK2Q16620 822 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 SLC25A35Q3KQZ1 300 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 PYDC2Q56P42 97 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 SFXN4Q6P4A7 337 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 CCBE1Q6UXH8 406 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 RPS4Y2Q8TD47 263 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 MRPL39Q9NYK5 338 aaKnown RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 HS3ST3B1Q9Y662 390 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 OR2T1O43869 369 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 RPP14O95059 124 aaKnown RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 OR6A2O95222 327 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 SLC2A2P11168 524 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 MAGEB1P43366 347 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 EVX1P49640 407 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 DLX5P56178 289 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 OR7A5Q15622 319 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 CCDC58Q4VC31 144 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 MZT2AQ6P582 158 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 ZNF517Q6ZMY9 492 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 DPY19L4Q7Z388 723 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 WDFY1Q8IWB7 410 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 RGP1Q92546 391 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 ORAI1Q96D31 301 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 SPACA9Q96E40 222 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 MRPL48Q96GC5 212 aaKnown RBP17.22■□□□□ 0.35
SMPD3-203ENST00000563226 PPP1R3EQ9H7J1 279 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 B3GAT2Q9NPZ5 323 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 B9D1Q9UPM9 204 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 RASD1Q9Y272 281 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 B3GALT1Q9Y5Z6 326 aa17.22■□□□□ 0.35
SMPD3-203ENST00000563226 H3BML4 177 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 MASP2O00187 686 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 UPK3AO75631 287 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 ABHD16AO95870 558 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 APOBEC1P41238 236 aaKnown RBP17.21■□□□□ 0.35
SMPD3-203ENST00000563226 FOXK1P85037 733 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 ETFDHQ16134 617 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 C5orf46Q6UWT4 87 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 CELF2-AS1Q8N7Q2 184 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 TEX19Q8NA77 164 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 POC1BQ8TC44 478 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 RHBDD1Q8TEB9 315 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 AMELYQ99218 206 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 TSPAN10Q9H1Z9 355 aaPredicted RBP17.21■□□□□ 0.35
SMPD3-203ENST00000563226 FBXL2Q9UKC9 423 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 GPR179Q6PRD1 2367 aa17.21■□□□□ 0.35
SMPD3-203ENST00000563226 PMS2P1A4D2B8 440 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 C9J4A7 227 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 MS4A18H0YCH9 400 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ITGA10O75578 1167 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 SERPINA3P01011 423 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 IGHMP01871 453 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 CD1AP06126 327 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 GP1BAP07359 652 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 IMPDH2P12268 514 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ELK1P19419 428 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 CASP3P42574 277 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 RFX2P48378 723 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 PLPPR5Q32ZL2 321 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 MS4A18Q3C1V0 323 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 LIPNQ5VXI9 398 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 LRRC69Q6ZNQ3 347 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 NRARPQ7Z6K4 114 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 TPRA1Q86W33 373 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 GDPD1Q8N9F7 314 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 OR5M1Q8NGP8 315 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 IMMP1LQ96LU5 166 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 NEDD4LQ96PU5 975 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 INTS14Q96SY0 518 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF700Q9H0M5 742 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 KCNG2Q9UJ96 466 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 LAMP5Q9UJQ1 280 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 A0A1B0GTH9 108 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ETV2O00321 342 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ZFPL1O95159 310 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 PAHP00439 452 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 UCHL1P09936 223 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 CTLA4P16410 223 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 CLDN6P56747 220 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 CCDC157Q569K6 752 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 DBX2Q6ZNG2 339 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-203ENST00000563226 YIPF7Q8N8F6 280 aa17.2■□□□□ 0.34
SMPD3-203ENST00000563226 ACOT12Q8WYK0 555 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms