RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 EFCAB11Q9BUY7 163 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 TTTY10Q9BZA0 68 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 MED17Q9NVC6 651 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 ACOT7O00154 380 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 PPM1DO15297 605 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 CD2P06729 351 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 PTNP21246 168 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 DLSTP36957 453 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 RPS15P62841 145 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 CXADRP78310 365 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 ZNF345Q14585 488 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 LY6G6FQ5SQ64 297 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 CYB5R2Q6BCY4 276 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 SZRD1Q7Z422 152 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 STOML3Q8TAV4 291 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 CA5BP1Q8WTZ4 195 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 SNX33Q8WV41 574 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 XAGE5Q8WWM1 108 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 S100A16Q96FQ6 103 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 F2RL3Q96RI0 385 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 NRIP2Q9BQI9 281 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 TRPV4Q9HBA0 871 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 RCC2Q9P258 522 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 PRAMEF27A3QJZ7 478 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 CDHR4A6H8M9 788 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 RNF222A6NCQ9 220 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 K7EQS6 105 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 FGF16O43320 207 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 B4GALT2O60909 372 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 ITGA3P26006 1051 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 AVPR2P30518 371 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 POU4F2Q12837 409 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 HSPB3Q12988 150 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 ITPRIPL2Q3MIP1 535 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 PYY3Q5JQD4 70 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 DMKNQ6E0U4 476 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 OR4C16Q8NGL9 310 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 CPNE4Q96A23 557 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 FOXJ3Q9UPW0 622 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 PCDHGA1Q9Y5H4 931 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 AP4M1O00189 453 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 FRS3O43559 492 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 TBX6O95947 436 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 NR2F1P10589 423 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 NT5EP21589 574 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 CERS1P27544 350 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 OMPP47874 163 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 MANFP55145 182 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 TAS2R43P59537 309 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 PCGF3Q3KNV8 242 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 METRNLQ641Q3 311 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 ADAMTSL4Q6UY14 1074 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 MEPCEQ7L2J0 689 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 GID4Q8IVV7 300 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 ZNF433Q8N7K0 673 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 OR10R2Q8NGX6 335 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 PIGXQ8TBF5 258 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 SYNPRQ8TBG9 265 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 MARS2Q96GW9 593 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 OR14A2Q96R54 314 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 HCAR1Q9BXC0 346 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 MYNNQ9NPC7 610 aa12.82□□□□□ -0.36
GTF3C1-203ENST00000562609 LOC390937A0A1W2PQ73 354 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 A0A1W2PQU0 124 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 URADA6NGE7 173 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 MT-ND4LP03901 98 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 PRG2P13727 222 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 CDK2P24941 298 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 PAX6P26367 422 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 STPG1Q5TH74 334 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 KRT77Q7Z794 578 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 LINC01555Q8NAE3 123 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 OR2T33Q8NG76 320 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 SAMD8Q96LT4 415 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 CMTM3Q96MX0 182 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TSPAN10Q9H1Z9 355 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 SDK1Q7Z5N4 2213 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3DA0A087WVF3 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3IA0A087WXS9 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3EA0A087X179 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3KA0A087X1G2 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3FA6NER0 549 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 A6NLC8 198 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 CPSF4LA6NMK7 179 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3LB9A6J9 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 SLC35G4P0C7Q5 338 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 TBC1D3HP0C7X1 549 aa12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 NME1P15531 152 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 FAUP35544 74 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 ELAVL1Q15717 326 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-203ENST00000562609 KRBOX4Q5JUW0 171 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms